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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91784127, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLYRRTAGA AFTSHPFFPF SNSEIAVRLT SIKLAGFKSF VDPTHFQVPG QLVGVVGPNG  60
   61 CGKSNIIDAV RWVLGESRAS ELRGESMQDV IFNGSTARKP GSRASVELVF DNADGRAAGQ 120
  121 WGQYAEIAVK RVLTRDGTSS YYINNLPARR RDIQDIFLGT GLGPRAYAII GQGMIARLIE 180
  181 AKPEELRVFL EEAAGVSKYK ERRRETENRL HDTRENLTRV EDIVRELGAN LEKLEAQAVV 240
  241 ATRYKELQAD GEEKQRLLWL LRKNEAGGEQ ERQQRAIEQA QIDLEAHTAK LREVEAQLET 300
  301 LRVAHYSASD AMQGAQGALY EANSEVSRLE AEIKFIVESR NRVQAQIAAL NAQREQWQSQ 360
  361 AQKAQDDLAD AEEQLAVAEE KATLVEDEAA AKHDAMPALE ARWRDAQTEL NAERGGIAQT 420
  421 EQALKLEAAH QRNADQQLQQ LQARHERLKS EAGGLDAPDE AQLEDLRMQL AEHEEILHDA 480
  481 QTRLADAQET LPRLDGERRA AQERVQAESS QIHQLDARLA ALKQLQENVQ TEGKIQPWLE 540
  541 KHELNGLPRL WKKLHVEAGW EAALEAVLRE RLAALEVSNL DWVKAFATDA PPAKLAFYAP 600
  601 PVAGQPAATP PALRPLLSLV RIDDAGIRAV LNDWLGLSFV ADDLQQALAM RSQLPEGGSF 660
  661 VVKAGHVVTR VGVQLYAADS EQAGMLARQQ EIENLARQVR AQALLADEAK AAAIRAEAAH 720
  721 TQAAQALTDV RQQAERATQR VHALQMDVLK LTQAHERYTQ RSTQIREELA EITAQIEEQR 780
  781 AMRAESEANF ERHDGELAEL QARFEDHQLA FEALDEELTA ARGQARDLDR AATDARFAAR 840
  841 NMANRIDELK RSIQVAHEQS ERVAASLEDA RAELETINEQ TAHTGLQDAL DIRAVKEEAL 900
  901 HAARLELDDL TAKLRAADET RLTAERALQP LRDRINELQL KEQAARLNGE QFIEQLAAAG 960
  961 VDEAQLQAKL TPDMKPSYLQ GEVTRINNAI TALGPVNMAA LDELKAATER KSFLDAQSTD1020
 1021 LNSAIETLED AIRKIDAETR TLLQGTFDQV NQHFGELFPR LFGGGQAKLI MTGDEILDAG1080
 1081 VQVMAQPPGK KNSTIHLLSG GEKALTATAL VFAMFQLNPA PFCLLDEVDA PLDDANTERF1140
 1141 ANLVRAMSDK TQFLFISHNK IAMEMAQQLI GVTMQEQGVS RIVAVDMETA AGFAQNIV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle