YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91779503, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAFLSGRME VLILTIPVCA PARPLSRAPK RKLPRGTVDC HFHVFGPAEE WPYAPGRSYT  60
   61 PPDATLADYE RLAQTFGICR SVIIQPSPYG MDNRRSLQAV SDSRLEMRAV LVVEPTVSDA 120
  121 ELGEYHRLGA RGVRLNLLFG AGLAVETADV LARRIRDLDW HLQFLADVST IDDLPRLVQR 180
  181 LRVPVVFDHL GHVPAHKGTR NAGFQNLLAL VREGLAWVKL SGLYRSTGLA NTPYDDTRPF 240
  241 IDALIDANPR QLLWGTDWPH PSIAVPMPDD TDLVDQFGAW VEDEALQQAI LVDNPERLYG 300
  301 FEPYVG

Type	Start	End	Confidence
Signal Peptide	1	24	0.71
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	306	0.98