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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94369081, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLVRSENGQ LLMIPQQALA QMQAHAQAQP QSTMAPRPAT PTGAPPVQIS TVQAPGTPII  60
   61 ARQVTPTTII KQVSQAQTTV QPTTTLQRSP GVQPQLVLGG SAQPASLGTA TAVQTGTPQR 120
  121 TVPGASTTST AATETMENVK KCKSFLSTLI KLASSGKQST ETAANVKDLV QNLLDGKIEA 180
  181 EDFTSRLYRE LNSSPQPYLV PFLKRSLPAL RQLTPDSAAF IQQSQQQQPP ASQATTALTA 240
  241 VVLSSSVQRT AGKTAASVTS ALQPPVISLT QPTQVGVGKQ APPTPLVIQQ PPKPGALIRP 300
  301 PQVTLTQTPM VALRQPHNRI MLTTPQQIQL NQLQPVPVVK PTVLPGTKAL STVSAQAAAA 360
  361 QKNKLKEPGG GSFRDDDDIN DVASMAGVNL SEESARILAT NSELVGTLTR SCKDDTFLLP 420
  421 APLQRRILEI GKKHGITELH PDVVSYVSHA TQQRLQNLVE KISETAQQKN FSYKDDDRYE 480
  481 QASDVRAQLK FFEQLDQIEK QRKDEQEREI LMRAAKSRSR QEDPEQLRLK QKAKEMQQQE 540
  541 LAQMRQRDAN LTALAAIGPR KKRKVDCTGP GSGAEGSGPG AAVPGGSGVG TPRQFTRQRI 600
  601 TRVNLRDLIF CLENERETSH SLLLYKAFLK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle