YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90083054
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMMEAQGGP SPGQTCVLIL IFTVLLQSLC AAVTYVYFTN ELKQMQDKYS KSGIACFLKE  60
   61 DDSSWDPNDE ESMKSPCWQV KWQLRQLVRK MILRTSEETI STVQEKQQNT SPLVRERGPQ 120
  121 RVAAHITGTR GRSNTLSSPN SKNEKALGRK INSWESSRSG HSFLSNLHLR NGELVIQEKG 180
  181 FYYIYSQTYF RFQEEIKENT KNDKQMVQYI YKYTSYPDPI LLMKSARNSC WSKDAEYGLY 240
  241 SIYQGGLFEL KKDDRIFVSV TNEHLIDMDH EASFFGAFLV G

Type	Start	End	Confidence
Signal Peptide	1	31	0.60
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	281	0.88