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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149064782, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPLLPLSAL LLLFLCDVDP ANANSYYDKV LAHSRIRGRD QGPNVCALQQ ILGTKKKYFS  60
   61 SCKNWYQGAI CGKKTTVLYE CCPGYMRMEG MKGCPAVMPI DHVYGTLGIV GATTTQHYSD 120
  121 VSKLREEIEG KGSYTYFAPS NEAWDNLDSD IRRGLENNVN VELLNALHSH MVNKRMLTKD 180
  181 LKHGMVIPSM YNNLGLFINH YPNGVVTVNC ARVIHGNQIA TNGVVHVIDR VLTQIGTSIQ 240
  241 DFIEAEDELS SFRAAAITSD LLESLGRDGH FTLFAPTNEA FEKLPRGVLE RIMGDKVASE 300
  301 ALMKYHILNT LQCSEAITGG AVFETMEGNT IEIGCEGDSI SINGIKMVNK KDIVTKNGVI 360
  361 HLIDEVLIPD SAKQVIELAG KQQTTFTDLV AQLGLASSLK PDGEYTLLAP VNNAFSDDTL 420
  421 SMDQRLLKLI LQNHILKVKV GLSDLYNGQI LETIGGKQLR VFVYRTAICI ENSCMVRGSK 480
  481 QGRNGAIHIF REIIQPAEKS LHEKLRQDKR FSIFLSLLEA ADLKDLLTQP GDWTLFAPTN 540
  541 DAFKGMTNEE REILIGDKNA LQNIILYHLT PGVYIGKGFE PGVTNILKTT QGSKIYVKGV 600
  601 NETLLVNELK SKESDIMTTN GVIHVVDKLL YPADIPVGND QLLELLNKLI KYIQIKFVRG 660
  661 STFKEIPMTV YTTKIITKLV EPKIKVIQGS LQPIIKTEGP AMTKIHIEGE PDFRLIKEGE 720
  721 TVTEVIHGEP VIKKYTKIID GVPVEITEKE TREERIITGP EIKYTRISTG GGETEETLQK 780
  781 FLQKDTPAKK IQANKRVQGS RRRSREGRSQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle