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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FAT1
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRHLALLLL LLLLFQHFGD SDGSQRLEQT PLQFTHLEYN VTVQENSAAK TYVGHPVKMG  60
   61 VYITHPAWEV RYKIVSGDSE NLFKAEEYIL GDFCFLRIRT KGGNTAILNR EVKDHYTLIV 120
  121 KALEKNTNVE ARTKVRVQVL DTNDLRPLFS PTSYSVSLPE NTAIRTSIAR VSATDADIGT 180
  181 NGEFYYSFKD RTDMFAIHPT SGVIVLTGRL DYLETKLYEM EILAADRGMK LYGSSGISSM 240
  241 AKLTVHIEQA NECAPVITAV TLSPSELDRD PAYAIVTVDD CDQGANGDIA SLSIVAGDLL 300
  301 QQFRTVRSFP GSKEYKVKAI GDIDWDSHPF GYNLTLQAKD KGTPPQFSSV KVIHVTSPQF 360
  361 KAGPVKFEKD VYRAEISEFA PPNTPVVMVK AIPAYSHLRY VFKRTPGKAK FSLNYNTGLI 420
  421 SILEPVKRQQ AAHFELEVTT SDRKASTKVL VKVLGANSNP PEFTQTAYKA AFDENVPIGT 480
  481 TIMSLSAVDP DEGENGYVTY SIANLNHVPF AIDHFTGAVS TSENLDYELM PRVYTLRIRA 540
  541 SDWGLPYRRE VEVLATITLN NLNDNTPLFE KINCEGTIPR DLGVGEQITT VSAIDADELQ 600
  601 LVQYQIEAGN ELDLFSLNPN SGVLSLKRSL MDGLGAKVSF HSLRITATDG ENFATPLYIN 660
  661 ITVAASHKLV NLQCEETGVA KMLAEKLLQA NKLHNQGEVE DIFFDSHSVN AHIPQFRSTL 720
  721 PTGIQVKENQ PVGSSVIFMN STDLDTGFNG KLVYAVSGGN EDSCFMIDME TGMLKILSPL 780
  781 DRETTDKYTL NITVYDLGIP QKAAWRLLHV VVVDANDNPP EFLQESYFVE VSEDKEVHSE 840
  841 IIQVEATDKD LGPNGHVTYS ILTDTDTFSI DSVTGVVNIA RPLDRELQHE HSLKIEARDQ 900
  901 AREEPQLFST VVVKVSLEDV NDNPPTFIPP NYRVKVREDL PEGTVIMWLE AHDPDLGQSG 960
  961 QVRYSLLDHG EGNFDVDKLS GAVRIVQQLD FEKKQVYNLT VRAKDKGKPV SLSSTCYVEV1020
 1021 EVVDVNENLH PPVFSSFVEK GTVKEDAPVG SLVMTVSAHD EDAGRDGEIR YSIRDGSGVG1080
 1081 VFKIGEETGV IETSDRLDRE STSHYWLTVF ATDQGVVPLS SFIEIYIEVE DVNDNAPQTS1140
 1141 EPVYYPEIME NSPKDVSVVQ IEAFDPDSSS NDKLMYKITS GNPQGFFSIH PKTGLITTTS1200
 1201 RKLDREQQDE HILEVTVTDN GSPPKSTIAR VIVKILDEND NKPQFLQKFY KIRLPEREKP1260
 1261 DRERNARREP LYRVIATDKD EGPNAEISYS IEDGNEHGKF FIEPKTGVVS SKRFSAAGEY1320
 1321 DILSIKAVDN GRPQKSSTTR LHIEWISKPK QSLEPISFEE SFFTFTVMES DPVAHMIGVI1380
 1381 SVEPPGIPLW FDITGGNYDS HFDVDKGTGT IIVAKPLDAE QKSNYNLTVE ATDGTTTILT1440
 1441 QVFIKVIDTN DHRPQFSTSK YEVVIPEDTA PETEILQISA VDQDEKNKLI YTLQSSRDPL1500
 1501 SLKKFRLDPA TGSLYTSEKL DHEAVSPAHL TVMVRDQDVP VKRNFARIVV NVSDTNDHAP1560
 1561 WFTASSYKGR VYESAAVGSV VLQVTALDKD KGKNAEVLYS IESGNIGNIG NSFMIDPVLG1620
 1621 SIKTAKELDR SNQAEYDLMV KATDKGSPPM SEITSVRIFV TIADNASPKF TSKEYSVELS1680
 1681 ETVSIGSFVG MVTAHSQSSV VYEIKDGNTG DAFDINPHSG TIITQKALDF ETLPIYTLII1740
 1741 QGTNMAGLST NTTVLVHLQD ENDNAPVFMQ AEYTGLISES ASINSVVLTD RNVPLVIRAA1800
 1801 DADKDSNALL VYHIVEPSVH TYFAIDSSTG AIHTVLSLDY EETSIFHFTV QVHDMGTPRL1860
 1861 FAEYAANVTV HVIDINDCPP VFAKPLYEAS LLLPTYKGVK VITVNATDAD SSAFSQLIYS1920
 1921 ITEGNIGEKF SMDYKTGALT VQNTTQLRSR YELTVRASDG RFAGLTSVKI NVKESKESHL1980
 1981 KFTQDVYSAV VKENSTEAET LAVITAIGSP INEPLFYHIL NPDRRFKISR TSGVLSTTGT2040
 2041 PFDREQQEAF DVVVEVIEEH KPSAVAHVVV KVIVEDQNDN APVFVNLPYY AVVKVDTEVG2100
 2101 HVIRYVTAVD RDSGRNGEVH YYLKEHHEHF QIGPLGEISL KKQFELDTLN KEYLVTVVAK2160
 2161 DGGNPAFSAE VIVPITVMNK AMPVFEKPFY SAEIAESIQV HSPVVHVQAN SPEGLKVFYS2220
 2221 ITDGDPFSQF TINFNTGVIN VIAPLDFEAH PAYKLSIRAT DSLTGAHAEV FVDIIVDDIN2280
 2281 DNPPVFAQQS YAVTLSEASV IGTSVVQVRA TDSDSEPNRG ISYQMFGNHS KSHDHFHVDS2340
 2341 STGLISLLRT LDYEQSRQHT IFVRAVDGGM PTLSSDVIVT VDVTDLNGNP PLFEQQIYEA2400
 2401 RISEHAPHGH FVTCVKAYDA DSSDIDKLQY SILSGNDHKH FVIDSATGII TLSNLHRHAL2460
 2461 KPFYSLNLSV SDGVFRSSTQ VHVTVIGGNL HSPAFLQNEY EVELAENAPL HTLVMEVKTT2520
 2521 DGDSGIYGHV TYHIVNDFAK DRFYINERGQ IFTLEKLDRE TPAEKVISVR LMAKDAGGKV2580
 2581 AFCTVNVILT DDNDNAPQFR ATKYEVNIGS SAAKGTSVVK SASDADEGSN ADITYAIEAD2640
 2641 SESVKENLEI NKLSGVITTK ESLIGLENEF FTFFVRAVDN GSPSKESVVL VYVKILPPEM2700
 2701 QLPKFSEPFY TFTVSEDVPV GTEIDLIRAE HSGTVLYSLV KGNTPESNRD ESFVIDRQSG2760
 2761 RLKLEKSLDH ETTKWYQFSI LARCTQDDHE MVASVDVSIQ VKDANDNSPV FESSPYEAFI2820
 2821 VENLPGGSRV IQIRASDADS GTNGQVMYSL DQSQSVEVIE SFAINMETGW ITTLKELDHE2880
 2881 KRDNYQIKVV ASDHGEKIQL SSTAIVDVTV TDVNDSPPRF TAEIYKGTVS EDDPQGGVIA2940
 2941 ILSTTDADSE EINRQVTYFI TGGDPLGQFA VETIQNEWKV YVKKPLDREK RDNYLLTITA3000
 3001 TDGTFSSKAI VEVKVLDAND NSPVCEKTLY SDTIPEDVLP GKLIMQISAT DADIRSNAEI3060
 3061 TYTLLGSGAE KFKLNPDTGE LKTSTPLDRE EQAVYHLLVR ATDGGGRFCQ ASIVVTLEDV3120
 3121 NDNAPEFSAD PYAITVFENT EPGTLLTRVQ ATDADAGLNR KILYSLIDSA DGQFSINELS3180
 3181 GIIQLEKPLD RELQAVYTLS LKAVDQGLPR RLTATGTVIV SVLDINDNPP VFEYREYGAT3240
 3241 VSEDILVGTE VLQVYAASRD IEANAEITYS IISGNEHGKF SIDSKTGAVF IIENLDYESS3300
 3301 HEYYLTVEAT DGGTPSLSDV ATVNVNVTDI NDNTPVFSQD TYTTVISEDA VLEQSVITVM3360
 3361 ADDADGPSNS HIHYSIIDGN QGSSFTIDPV RGEVKVTKLL DRETISGYTL TVQASDNGSP3420
 3421 PRVNTTTVNI DVSDVNDNAP VFSRGNYSVI IQENKPVGFS VLQLVVTDED SSHNGPPFFF3480
 3481 TIVTGNDEKA FEVNPQGVLL TSSAIKRKEK DHYLLQVKVA DNGKPQLSSL TYIDIRVIEE3540
 3541 SIYPPAILPL EIFITSSGEE YSGGVIGKIH ATDQDVYDTL TYSLDPQMDN LFSVSSTGGK3600
 3601 LIAHKKLDIG QYLLNVSVTD GKFTTVADIT VHIRQVTQEM LNHTIAIRFA NLTPEEFVGD3660
 3661 YWRNFQRALR NILGVRRNDI QIVSLQSSEP HPHLDVLLFV EKPGSAQIST KQLLHKINSS3720
 3721 VTDIEEIIGV RILNVFQKLC AGLDCPWKFC DEKVSVDESV MSTHSTARLS FVTPRHHRAA3780
 3781 VCLCKEGRCP PVHHGCEDDP CPEGSECVSD PWEEKHTCVC PSGRFGQCPG SSSMTLTGNS3840
 3841 YVKYRLTENE NKLEMKLTMR LRTYSTHAVV MYARGTDYSI LEIHHGRLQY KFDCGSGPGI3900
 3901 VSVQSIQVND GQWHAVALEV NGNYARLVLD QVHTASGTAP GTLKTLNLDN YVFFGGHIRQ3960
 3961 QGTRHGRSPQ VGNGFRGCMD SIYLNGQELP LNSKPRSYAH IEESVDVSPG CFLTATEDCA4020
 4021 SNPCQNGGVC NPSPAGGYYC KCSALYIGTH CEISVNPCSS NPCLYGGTCV VDNGGFVCQC4080
 4081 RGLYTGQRCQ LSPYCKDEPC KNGGTCFDSL DGAVCQCDSG FRGERCQSDI DECSGNPCLH4140
 4141 GALCENTHGS YHCNCSHEYR GRHCEDAAPN QYVSTPWNIG LAEGIGIVVF VAGIFLLVVV4200
 4201 FVLCRKMISR KKKHQAEPKD KHLGPATAFL QRPYFDSKLN KNIYSDIPPQ VPVRPISYTP4260
 4261 SIPSDSRNNL DRNSFEGSAI PEHPEFSTFN PESVHGHRKA VAVCSVAPNL PPPPPSNSPS4320
 4321 DSDSIQKPSW DFDYDTKVVD LDPCLSKKPL EEKPSQPYSA RESLSEVQSL SSFQSESCDD4380
 4381 NGYHWDTSDW MPSVPLPDIQ EFPNYEVIDE QTPLYSADPN AIDTDYYPGG YDIESDFPPP4440
 4441 PEDFPAADEL PPLPPEFSNQ FESIHPPRDM PAAGSLGSSS RNRQRFNLNQ YLPNFYPLDM4500
 4501 SEPQTKGTGE NSTCREPHAP YPPGYQRHFE APAVESMPMS VYASTASCSD VSACCEVESE4560
 4561 VMMSDYESGD DGHFEEVTIP PLDSQQHTEV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle