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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114333518, gi...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSANNMTKY SLRSWVLVLA LAPTIVVGIL LGSYFTINRF YELEQTLIEK GSNIVEPLAI  60
   61 ASEFGIITQD RESTKLLLAA SQINNASLIL SIAVFDAENQ LFVTSHYHKD FETMRYKQTL 120
  121 ANLIGTEHET IGDTLVIRVP IISHTGLEPK HVASINRQSN GDINNNTSVN GVVTPIYNNQ 180
  181 QERILGYISV LLNKENALLE QHRAAIAAFI IVLIGVQFNL FFTFRLVKHV NYPITEMVRV 240
  241 VAKIREGKLD TRLEGNLIGE LDLLKRGINA MAGSLSEYHD EMQQNIDQAT SDLRETLEQI 300
  301 EIQNVELDIA KKRALEASRI KSEFLANMSH ELRTPLNGVI GFARQLLKTP LHTSQLDYIK 360
  361 TIERSASNLL GIINDILDFS KLEAGKMILE KMPFALRETL TETLTIIAGS AQEKGLELVI 420
  421 DIDANVPESV SGDAMRVSQI ITNLVGNAIK FTDKGSVILK IHLVGQDEDN ITLRCEVIDT 480
  481 GIGIDESQQE YLFQAFGQAD SSISRRFGGT GLGLVITKRL INQMGGQIGF TSAPNKGSNF 540
  541 WFILPLGISQ FEIGEVLPVD ALQHKSVLLY EPRELTRDTL NRRLVSWQLI ITNVANPENL 600
  601 TSVLQTKNSK FDYIIMSCHG FADNASFIHL LQQAKQHTDC LILLHDCLDQ DMIINVLKVN 660
  661 ADVLLSTPVS DFTLAHHLIY PPVPSTFVSL PEQINLDVTQ RLNASVLAVD DNMANLKLID 720
  721 TLLKELVDNV VTVNNGADAI QQAKKQPFDL IFMDIQMPGT DGITATQQIR SESLNRNTPI 780
  781 IAVTAHAIAE ERENILASGM DGFSPKPIDE LSLKSVISRW IIKPQFTHFD THVLNWDLCL 840
  841 TQANQKTDLA LDMLKMLVNS LPETTATIDE ALIARDAQTL LQAVHKLHGA TCYCGVPTTQ 900
  901 KLCRDIESAL KHKIDIDDLE PEILELLDEL TKVESAANQV INQLSVDVPH DQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle