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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114431224
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVGRRKLVP FWVLALALAC SQCTGQAQQD SLKSYHEHRS DVPHPQGHVG TPLNRVTIIP  60
   61 PLKTIPVVRA FNPGHTRRVC STWGNFHYKT FDGQVFYFPG LCNYVFSAHC GDAYEDFNIQ 120
  121 LRRVQESNTT TLSRVTMKLD GLVVELTKSS VLVNNHPVQL PFSQSGVLIE LSNGYLKVVA 180
  181 RLGLLFVWNE DDSLLLELDT KYTNKTCGLC GDFNGSPKSN EFLSNNVRLT PLEFGNLQKM 240
  241 DGPTEQCQDP LPVPQKNCSA RSGICEMILK GELFSGCAAL VDISSYVEAC RQDVCLCESL 300
  301 DPSDCICHTL AEYSRQCAHA GGQPQDWRGP NLCSQTCPLN MQHQECGSPC VDTCSNPQHS 360
  361 QVCEDHCIAG CFCPEGMVLD DINQMGCVPV SQCACLYNGT LYAPGTNYST DCTNTCSGGQ 420
  421 WSCQDIPCAG TCSVMGGSHM STFDGRQYTV HGDCTYVLSK PCDSNAFTVL VELRKCGLTE 480
  481 SETCLKTVTL NLGGGQTEIM VKATGEVFVN QIYTQLPVST ANATFFRPST FFIVGETNLG 540
  541 LQLEIQLSPI MQTSVRLKPG LRGLTCGLCG NFNSMQADDF QTISGVVEGT AAAFFNTFKT 600
  601 QAACPNVKNI FQDPCSLSVE NEKYAQHWCS LLTNASGPFS QCHATVNPST FFSNCMYDTC 660
  661 NCEKSEDCMC AALSSYVRAC AAKGVLLSDW RDGICTKPTI TCPKSMTYQY HISTCQPTCR 720
  721 ALNEKDVTCH VSFIPVDGCT CPKGTFLDDL GKCVQATSCP CYYKGSTVPN GESVQDSGAI 780
  781 CTCTQGALTC IGGPAPTPVC DAPMIYFDCH NATPGDTGAG CQKSCHTLDM TCYSSECVPG 840
  841 CVCPNGLVAD GNGGCVVTED CPCVHNEATY RPGETIQVGC NNCTCENRMW QCTDKPCLAT 900
  901 CAVYGDGHYI TFDGQRYSFN GDCEYTLLQD NCGGNGSSQD AFRVITENIP CGTTGTTCSK 960
  961 SIKIFLGNYE LKLSDSKMEV VQKDVGQEPP YFVHQMGNYL VVETDIGLVL LWDKKTSIFL1020
 1021 RLSPEFKGRV CGLCGNFDDN AINDFTTRSQ SVVSDMLEFG NSWKLSPSCP DVLVPKDPCT1080
 1081 ANPYRKSWAQ KQCSIINSET FSACHAHVEP AKYYEACVND ACACDSGGDC ECFCTTVAAY1140
 1141 AQACHEVGVC VSWRTPDICP LFCDYYNPEG QCEWHYQPCG APCMRTCQNP TGQCLQDLRG1200
 1201 LEGCYPKCPP TAPIFDEGTM QCVSNCTVTF PCRVNGKLYR PGASVPSDKN CDSCICTESG1260
 1261 VRCTHNAGAC VCTYNGQQFH PGEIIYHTTD GIGGCISAHC RANGTIERSV DTCNSTTPTP1320
 1321 PTTFSFSTPP VMTSMQPSST HSSPTPSVGS SGASSKAAST TSSILSVKSP VTAPMTMSTS1380
 1381 ASAVTTSGCR EECLWSPWMD VSRPGRGIDS GDFDTLENLR AHGYPICQVP KAVECRAEAS1440
 1441 PGVPLPELQQ HLECSTTVGL ICYNSDQLSG LCDNYQIKVQ CCTPVSCPTS QTTHVISSSR1500
 1501 TTNLDNTTSS VPVTSTEHPY SSTVTSGSST HTPGLSPSSS VPSSPTPASS TPAPVSSTTV1560
 1561 KTTLPITSPT PEPTPAISSV SISTSGSTMP SSETTHECKQ ELCNWTNWLD GSYPGSGRNS1620
 1621 GDFDTFVNLR SKGYKFCEKP RNVECRAQFF PNTPLEELGQ NVTCSREEGL ICLNKNQLPP1680
 1681 MCYNYEIRIE CCTVVNNCST ASVTTHPTSH GVSTKTETNW TTHVYSSPTK DTSSHSATID1740
 1741 TKTWTSGISH TTTQPVTTHC QLQCNWTKWF DTDFPVPGPH GGDLETYSNI ERSGERLCHR1800
 1801 EEITQLQCRA KNYPEREMED LGQVVKCDPS VGLVCNNRDQ GGDSGMCLNY EVRLLCCHIP1860
 1861 EDCPRTDQTS PVTLSHKPSS AVVSPSSVSP SLSTSHRVHS TTPCFCSVSG QLYPLGSIIY1920
 1921 NQTDLDGHCY YAMCSQDCQV VKRVSQDCPS TMPPPATTLS TSTTPPVTGR DRCNVFPPRL1980
 1981 RGETWPMPNC SQATCEGNNV ISLSPRQCPE LNEPSCANGY PPLKVDDQDG CCQHYQCQCV2040
 2041 CSGWGDPHYI TFDGTYYTFL DNCTYVLVQQ IVPVFGYFRV LIDNYYCDVG DSVSCPQSII2100
 2101 VEYHQDRVVL TRRPVSGVMT NQIIFNNKVV SPGFQQNGIV TSRVGIKMYV TIQEIGVRVM2160
 2161 FSGLIFSVEV PFNLFANNTE GQCGTCTNDK KDECRLPGGS IASSCSEMSL HWKVPNQPSC2220
 2221 QGPPPTPTSV VPRPSPTPCP PSPLCELILS NTFKLCHDVI PPLQFYQGCL FDYCHMLDLE2280
 2281 VVCSGLELYA SLCAAQGVCI PWRSQTNNTC SFTCPDNQVY QPCGPSNPHY CYRDDSISPS2340
 2341 LTLQEAGPKT EGCFCPDSTT LFSTNDSICV PSCQWCLGPR GEPVEPGHTI SIDCQDCICK2400
 2401 EATLTCQKKA CPQPTCPEPG FVPVPVALEA GQCCPQFSCA CNSSHCPPPL HCPKNSSLIV2460
 2461 TYEEGACCPT QNCSSQKGCE VNGTLYQPGD VVSSSLCERC LCEVSSNPLS DVFMVSCETE2520
 2521 LCNTQCPKGS EYQAMPGQCC GKCIPKTCPF KNNSGSTYFY QPGELWAEPG NPCVTHKCEK2580
 2581 FQDVLMVVTM KTECPKINCP QGQAQLREDG CCYDCPLPNQ QKCTVHQRQQ IIRQQNCSSE2640
 2641 GPVSISYCQG NCGDSISMYS LEANKVEHTC ECCQELQTSQ RNVTLRCDDG SSQTFSYTQV2700
 2701 EKCGCLGQQC HALGDTSHAE SSEQEFKSKE SEEHGQQLAF RVSEDMLGPF Q

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