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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114565254
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLILAFVSPS LSDITVCAHD HISWHLLGMS SGPELFSIHF NGQVLEQNHH KVSAITLVSA  60
   61 TSTTANMTVG PEGKWIISSL TPKHLQAGMQ AYIDIKNCPK KTRNLKKITR EQRRHMKRWE 120
  121 YFIAAEEVIW DYAPVIPANM DKKYRSQHLD NFSNQIGKHY KKVMYTQYED ESFTKHTVNP 180
  181 NMKEDGILGP IIRAQVRDTL KIVFKNMASR PYSIYPHGVT FSPYEDEVNS SFTSGRNNTM 240
  241 IRAVQPGETY TYKWNILEFD EPTENDAQCL TRPYYSDVDI MRDIASGLIG LLLICKSRSL 300
  301 DRRGIQRAAD IEQQAVFAVF DENKSWYLED NINKFCENPD EVKRDDPKFY ESNIMSSKSE 360
  361 LPDLSSVCLS SVGTWMLTSM NSSPRSKKLR LKFRDVKCIP DDDEDSYEIF EPPESTVMAT 420
  421 RKMHDRLEPE DEESDADYDY QNRLAAALGI RSFRNSSLNQ EEEEFNLTAL ALENGTEFVS 480
  481 SNTDIIVGSN YSSPSNISKF TVNNLAEPQK APSHQQATTA GSPLRHLIGK NSVLNSSTAE 540
  541 HSSPYSEDPI EDPLQPDVTG IRLLSLGAGE FKSQEHAKHK GPKVERDQAA KHRFSWMKLL 600
  601 AHKVGRHLSQ DTGSPSRMKP WEDLPSQDTG SPSRMRPWED PPSDLLLLKQ NNPSKILVGR 660
  661 WHLASEKGSY EIIQDTDEDT AVNNWLISPQ NASRAWGEST PLANKLGKQS GHPKFPRVRH 720
  721 KSLQVRQDGG KSRLKKSQFL IKTRKKKKEK HTHHAPLSPR TFHPLRSEAY NTFSERRLKH 780
  781 SLMLHKSNET SLPTDLNQTL PSMDFGWIAS LPDHNQNSSN DTGQTSCPPG LYQTVPPEEH 840
  841 YQTFPIQDPD QMHSTSDPSH ISSSPELSEM LEYDRSHKSF PTDISQMSPS SEHEVWQAVT 900
  901 SPDLSQVTLS PDLSQTNPSP DLSHTTLSPE LSQTNISPAL GQMPLSPDPS HTTLSLDHSQ 960
  961 TNLSPELSQT NLSPDLSEMP LFADLSQIPL TPDLDQMTLS PDLGETDLSP NFGRMSLSPD1020
 1021 LSQVTLSPDI SDTTLLPDLS QISPPPDLDQ IFYPSESSQS LLLQEFNESF PYPDLGQMPS1080
 1081 PSSPTLNDTF LSKEFNPLVI VGLSKDGTDY IEIIPKEEVQ SSEDDYAEID YVPYDDPYKT1140
 1141 DVRTNINSSR DPDNIAAWYL RSNNGNRRNY YIAAEEISWD YSEFVQRETD IEDSDDIPED1200
 1201 TTYKKVVFRK YLDSTFTKRD PRGEYEEHLG ILGPIIRAEV DDVIQVRFKN LASRPYSLHA1260
 1261 HGLSYEKSSE GKTYEDDSPE WFKEDNAVQP NSSYTYVWHA TERSGPESPG SACRAWAYYS1320
 1321 AVNPEKDIHS GLIGPLLICQ KGILHKDSNM PVDMREFVLL FMTFDEKKSW YYEKKSRSSW1380
 1381 RLTSSEMKKS HEFHAINGMI YSLPGLRMYE QEWVRLHLLN IGGSQDIHVV HFHGQTLLEN1440
 1441 GNKQHQLGVW PLLPGSFKTL EMKASKPGWW LLNTEVGENQ RAGMQTPFLI MDRDCRTPMG1500
 1501 LSTGIISDSQ IKASEFLGYW EPRLARLNNG GSYNAWSVEK LAAEFASKPW IQVDMQKEVI1560
 1561 ITGIQTQGAK HYLKSCYTTE FYVAYSSNQI NWQIFKGNST RNVMYFNGNS DASAIKENQF1620
 1621 DPPIVARYIR ISPTRAYNRP TLRLELQGCE VNGCSTPLGM ENGKIENKQI TASSFKKSWW1680
 1681 GDYWEPFRAR LNAQGRVNAW QAKANNNKQW LEIDLLKIKK ITAIITQGCK SLSSEMYVKS1740
 1741 YTIHYSDQGV EWKPYRLKSS MVDKIFEGNT NTKGHVKNFF NPPIISRFIR VIPKTWNQSI1800
 1801 ALRLELFGCD IY

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