YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114589729, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLALLVLVNV ALASAHHGGE HFEGEKVFRV NVEDENHINI IRELASTTQI DFWKPDSVTQ  60
   61 IKPHSTVDFR VKAEDTVTVE NVLKQNELQY KVLINNLRNV VEAQFDSRVR ATGHSYEKYN 120
  121 KWETIEAWTQ QVATENPALI SRSVIGTTFE GRAIYLLKVG KAGQNKPAIF MDCGFHAREW 180
  181 ISPAFCQWFV REAVRTYGHE IQVTELLDKL DFYVLPVLNI DGYIYTWTKS RLWRKTRSTH 240
  241 AGSSCIGTDP NRNFDAGWCE IGASQNPCAE TYCGPAAESE KETKALADFI RNKLSSIKAY 300
  301 LTIHSYSQMM IYPYSYAYKL GENNAELNAL AKATVKELAS LHGTKYTYGP GATTIYPAAG 360
  361 GSDDWAYDQG IRYSFTFELR DTGRYGFLLP ESQIRATCEE TFLAIKYVAS YVLEHLY

Type	Start	End	Confidence
Signal Peptide	1	15	0.97
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	417	0.99