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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114594037
Protein type: Globular with Signal Peptide
Type Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPKTAAVG PLVGAVVQGT NSTRFLVFNS KTAELLSHHK VELTQEFPKE GWVEQDPKEI  60
   61 LQSVYECIAR TCEKLDELNI DISNIKAVGV SNQRETTVIW DKLTGEPLYN AVVWLDLRTQ 120
  121 TTVEDLSKKI PGNSNFVKSK TGLPLSTYFS AVKLRWMLDN VRNVQKAVEE GRALFGTIDS 180
  181 WLIWSLTGGV NGGVHCTDVT NASRTMLFNI HSLEWDKELC DFFEIPMDLL PNVFSSSEIY 240
  241 GLIKTGALEG VPISGCLGDQ CAALVGQMCF QEGQAKNTYG TGCFLLCNTG RKCVFSEHGL 300
  301 LTTVAYKLGR EKPAYYALEG SVAIAGAVIR WLRDNLGIIE TSGDIERLAK EVGTSYGCYF 360
  361 VPAFSGLYAP YWEPSARGIL CGLTQFTNKC HIAFAALEAV CFQTREILEA MNRDCGIPLR 420
  421 HLQVDGGMTN NKVLMQLQAD ILHIPVIKPF MPETTALGAA MAAGAAEGVS VWSLEPQALS 480
  481 VLRMERFEPQ IQATESEIRY ATWKKAVMKS MGWVTRQSPE SGDPSIFSSL PLGFFIEHSI 540
  541 GKNVLLTSLL GFSFLEESSL FNRSLRLQMI GINLYTIFNI GEAHKVSNLG AIDLIFLCEY 600
  601 FCSLENLAGE ESELMGNGNK SDALLKAAVW HHLFHLLLLP PSRHPASTRF SPVVLAPWTR 660
  661 FLRQTVPLKV GDSLFWIHCS PTGSLRSAIM NIRNARPDDL MNMQHCNLLC LPENYQMKYY 720
  721 LYHGLSWPQL SYIAEDEDGK IVGYVLAKME EEPDDVPHGH ITSLAVKRSH RRLGLAQKLM 780
  781 DQASRAMIEN FNAKYVSLHV RKSNRAALHL YSNTLNFQIS EVEPKYYADG EDAYAMKRDL 840
  841 SQMADELRRQ TDLKKGGYVV LGSRENQETQ GSTLSDSEEA CQQKNPATEE SGSDSKEPKE 900
  901 SVESTNVQDS SESSDSTS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle