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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114594555
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.40
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGSGPRGAG RRRPPSGGGD TPITPASLAG CYSAPRRAPL WTCLLLCAAL RTLLASPSNE  60
   61 VNLLDSRTVM GDLGWIAFPK NGWEEIGEVD ENYAPIHTYQ VCKVMEQNQN NWLLTSWISN 120
  121 EGASRIFIEL KFTLRDCNSL PGGLGTCKET FNMYYFESDD QNGRNIKENQ YIKIDTIAAD 180
  181 ESFTELDLGD RVMKLNTEVR DVGPLSKKGF YLAFQDVGAC IALVSVRVYY KKCPSVVRHL 240
  241 AVFPDTITGA DSSQLLEVSG SCVNHSVTDE PPKMHCSAEG EWLVPIGKCM CKAGYEEKNG 300
  301 TCQVCRPGFF KASPHIQSCG KCPPHSYTHE EASTSCVCEK DYFRRESDPP TMACTRPPSA 360
  361 PRNAISNVNE TSVFLEWIPP ADTGGRKDVS YYIACKKCNS HAGVCEECGG HVRYLPRQSG 420
  421 LKNTSVMMVD LLAHTNYTFE IEAVNGVSDL SPGTRQYVSV NVTTNQAAPS PVTNVKKGKI 480
  481 AKNSISLSWQ EPDRPNGIIL EYEIKYFEKR HHSFTSYTII KSKETTITAE GLKPASVYVF 540
  541 QIRARTAAGY GVFSRRFEFE TTPVADYTSS DQSQIPIIAV SVTVGVILLA VVIGVLLTCP 600
  601 RKDAWSSEGC MSDKLQHMDT GRGTSHSGDF KLPGVRTYID PHTYEDPNQA VHEFAKEIEA 660
  661 SCITIERVIG AGEFGEVCSG RLKLPGKREL PVAIKTLKVG YTEKQRRDFL GEASIMGQFD 720
  721 HPNIIHLEGV VTKSKPVMIV TEYMENGSLD TFLKKNDGQF TVIQLVGMLR GISAGMKYLS 780
  781 DMGYVHRDLA ARNILINSNL VCKVSDFGLS RVLEDDPEAA YTTRVRSNRG GKIPIRWTAP 840
  841 EAIAFRKFTS ASDVWSYGIV MWEVVSYGER PYWEMTNQDV IKAVEEGYRL PSPMDCPAAL 900
  901 YQLMLDCWQK DRNSRPKFDE IVNMLDKLIR NPSSLKTLVN ASCRVSNLLA EHSPLGSGAY 960
  961 RSVGEWLEAI KMGRYTEIFM ENGYSSMDAV AQVTLEDLRR LGVTLVGHQK KIMNSLQEMK1020
 1021 VQLVNGMVPL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle