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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114619380
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMYLQTSTT PQYWVPPRSH VHISRALHTG VAARVHGTPQ RSDANHPASG SAPQRSTRPS  60
   61 ACALPPTAGA LRAQAERSAA SRKPAGCDAA HWWSRAPGVP GRPSRIGISC LFPASWHFSI 120
  121 SPVGCPRILN TNLRQIMVIS VLAAAVSLLY FSVVIIRNKY GRLTRDKKFQ RYLARVTDIE 180
  181 ATDTNNPNVN YGIVVDCGSS GSRVFVYCWP RHNGNPRDLL DIRQMRDKNR KPVVMKIKPG 240
  241 ISEFATSPEK VSDYISPLLN FAAEHVPRAK HKETPLYILC TAGMRILPES QQKAILEDLL 300
  301 TDIPVHFDFL FSDSHAEVIS GKQEGVYAWI GINFVLGRFE HIEDDDEAVV EVNIPGSESS 360
  361 EAIVRKRTAG ILDMGGVSTQ IAYEVPKTEE VAKNLLAEFN LGCDVHQTEH VYRVYVATFL 420
  421 GFGGNAARQR YEDRIFANTI QKNRLLGKQT GLTPDMPYLD PCLPLDIKDE IQQNGQTIYL 480
  481 RGTGDFDLCR ETIQPFMNKT NETQTSLNGV YQPPIHFQNS EFYGFSEFYY CTEDVLRMGG 540
  541 DYNAAKFTKA AKDYCATKWS ILRERFDRGL YASHADLHRL KYQCFKSAWM FEVFHRGFSF 600
  601 PVNYKSLKTA LQVYDKEVQW TLGAILYRTR FLPLRDIQQE AFRASHTHWR GVSFVYNHYL 660
  661 FSGCFLVVLL AILLYLLRLR RIHRRTPRSS SAAALWMEEG LPAQNAPGTL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle