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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114630532
Protein type: Transmembrane
Type Confidence: 0.52
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKRTFSNLE TFLIFLLVMM SAITVALLSL LFITSGTIEN HKDLGGHFFS TTQSPPATQG  60
   61 STATQRSTVT QYSTATQSST ATQTSPVTLT PESPLFQNFS GYHIGVGRAD CTGQVADINL 120
  121 MGYGKSSQNA QGILTRLYSR AFIMAEPDGS NRTVFVSIDI GMLSQRLRLE VLNRLQSKYG 180
  181 SLYRRDNVIL SGTHTHSGPA GYFQYTVFVI ASEGFSNQTF QHMVTGILKS IDIAHTNMKP 240
  241 GKIFINKGNV DGVQINRSPY SYLQNPQSER ARYSSNTDKE MIVLKMVDLN GDDLGLISWF 300
  301 AIHPVSMNNS NHLVNSDNVG YASYLLEQEK NKGYLPGQGP FVAAFASSNL GDVSPNILGP 360
  361 RCINTGESCD NANSTCPIGG PSMCIAKGPG QDMFDSTQII GRAMYQRAKE LYASASQEVT 420
  421 GPLASAHQWV DMTDVTVWLN STHASKTCKP ALGYSFAAGT IDGVGGLNFT QGKREGDPFW 480
  481 DTIRDQILGK PSEEIKECHK PKPILLHTGE LSKPHPWHPD IVDVQIITLG SLAITAIPGE 540
  541 FTTMSGRRLR EAVQAEFASH GMQNMTVVIS GLCNVYTHYI TTYEEYQAQR YEAASTIYGP 600
  601 HTLSAYIQLF RNLAKAIATD TVANLSRGPE PPFFKQLIVP LIPSIVDRAP KGRTFGDVLQ 660
  661 PAKPEYRVGE VAEVIFVGAN PKNSVQNQTH QTFLTVEKYE ATSTSWQIVC NDASWETRFY 720
  721 WHKGLLGLSN ATVEWHIPDT AQPGIYRIRY FGHNRKQDIL KPAVVLSFEG TSPAFEVVTI 780
  781 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle