YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114645493
Protein type: Globular with Signal Peptide
Type Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSGGGCSGS LSLRGSASFK LSGVCPDSRG LTFSVAILPA KKEDFMAELY RVLEAGKIGI  60
   61 FESPTGTGKS LSLICGALSW LRDFEQKKRE EEARLIETGT GSLHDEKDES LCLSSSCEGA 120
  121 AGTPRPAGEP AWVTQFVQKK EERDLVDRLK AEQARRKQRE ERLQQLQHRV QLKYAAKRLR 180
  181 QEEEETENLL RLSREMLETG PEAERLEQLE SGEEELVLAE YESDEEKKVA SGVDEDEDDL 240
  241 EEEHITKIYY CSRTHSQLAQ FVHEVKKSPF GKDVRLVSLG SRQNLCVNED VKSLGSVQLI 300
  301 NDRCVDMQRS RHEKKKGAEE EKPKRRRQEK QAACPFYNHE QMGLLRDEAL AEVKDIEQLL 360
  361 ALGKEARACP YYGSRLAIPA AQLVVLPYQM LLHAATRQAA GIRLQDQVVI IDEAHNLIDT 420
  421 ITGMHSVEVS GSQLCQAHSQ LLQYMEQYGK RLKAKNLMYL KQILYLLEKF VAVLGGNIKQ 480
  481 NPNTQSLSQT GTELKTINDF LFQSQIDNIN LFKVQRYCEK SMISRKLFGF TERYGAVFSS 540
  541 REQPKLAGFQ QFLQSLQPRM TEALAAPADE SQASTPRPAS PLMHIEGFLA ALTTANQDGR 600
  601 VILSRQGSLS QSTLKFLLLN PAVHFAQVVK ECRAVVIAGG TMQPVSDFRQ QLLACAGVEA 660
  661 ERVVEFSCGH VIPPDNILPL VICSGISNQP LEFTFQKREL PQMMDEVGRI LCNLCGVVPG 720
  721 GVVCFFPSYE YLRQVHAHWE KGGLLGRLAA RKKIFQEPKS AHQVEQVLLA YSRCIQACGQ 780
  781 ERGQVTGALL LSVVGGKMSE GINFSDNLGR CVVMVGMPFP NIRSAELQEK MAYLDQTLPR 840
  841 APGQAPPGKA LVENLCMKAV NQSIGRAIRH QKDFASIVLL DQRYARPPVL AKLPAWIRAR 900
  901 VEVKATFGPA IAAMQKFHRE KSASS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle