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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114650444
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAMRAGVCL VVLSSGNLNQ LYIIQSKNVN ETVSHDETYE NIPGQSKITF LLQAIRNTTA  60
   61 AEEARQMAAV LLRRLLSSAF DEVYPALPSD VQTAIKSELL MIIQMETQSS MRKKVCDIAA 120
  121 ELARNLIDED GNNQWPEGLK FLFDSVSSQN VGLREAALHI FWNFPGIFGN QQQHYLDVIK 180
  181 RMLVQCMQDQ EHPSIRTLSA RATAAFILAN EHNVALFKHF ADLLPGFLQA VNDSCYQNDD 240
  241 SVLKSLVEIA DTVPKYLRPH LEATLQLSLK LCGDTSLNNM QRQLALEVIV TLSETAAAML 300
  301 RKHTNIVAQT IPQMLAMMVD LEEDEDWANA DELEDDDFDS NAVAGESALD RMACGLGGKL 360
  361 VLPMIKEHIM QMLQNPDWKY RHAGLMALSA IGEGCHQQME GILNEIVNFV LLFLQDPHPR 420
  421 VRYAACNAVG QMATDFAPGF QKKFHEKVIA ALLQTMEDQG NQRVQAHAAA ALINFTEDCP 480
  481 KSLLIPYLDN LVKHLHSIMV LKLQELIQKG TKLVLEQVVT SIASVADTAE EKFVPYYDLF 540
  541 MPSLKHIVEN AVQKELRLLR GKTIECISLI GLAVGKEKFM QDASDVMQLL LKTQTDFNDM 600
  601 EDDDPQISYM ISAWARMCKI LGKEFQQYLP VVMGPLMKTA SIKPEVALLD TQDMENMSDD 660
  661 DGWEFVNLGD QQSFGIKTAG LEEKSTACQM LVCYAKELKE GFVEYTEQVV KLMVPLLKFY 720
  721 FHDGVRVAAA ESMPLLLECA RVRGPEYLTQ MWHFMCDALI KAIGTEPDSD VLSEIMHSFA 780
  781 KCIEVMGDGC LNNEHFEELG GILKAKLEEH FKNQELRQVK RQDEDYDEQV EESLQDEDDN 840
  841 DVYILTKVSD ILHSIFSSYK EKVLPWFEQL LPLIVNLICP HRPWPDRQWG LCIFDDVIEH 900
  901 CSPASFKYAE YFLRPMLQYV CDNSPEVRQA AAYGLGVMAQ YGGDNYRPFC TEALPLLVRV 960
  961 IQSADSKTKE NVNATENCIS AVGKIMKFKP DCVNVEEVLP HWLSWLPLHE DKEEAVQTFN1020
 1021 YLCDLIESNH PIVLGPNNTN LPKIFSIIAE GEMHEAIKHE DPCAKRLANV VRQVQTSGGL1080
 1081 WTECIAQLSP EQQAAIQELL NSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle