YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114651578
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTWFSLTALL SPSLPALDLV DGAGDSRPGE VVPTEGMRSR SQQLLPQPPH STGSSAAGAP  60
   61 LGRASGPRRP SVLPSAALSA AARRRLCPGP AALASRPVRA ADPEEPRCGW PREVKFWARA 120
  121 STPPRLPPSF RPLAAPASFP QISDRPFAPP PRPPPVLRSP PLGSPAAGGG AGVTMAEAPQ 180
  181 VVEIDPDFEP LPRPRSCTWP LPRPEFSQSN SATSSPAPSG SAAANPDAAA GLPSASAAAV 240
  241 SADFMSNLSL LEESEDFPQA PGSVAAAVAA AAAAAATGGL CGDFQGPEAG CLHPAPPQPP 300
  301 PPGPLSQHPP VPPAAAGPLA GQPRKSSSSR RNAWGNLSYA DLITKAIESS AEKRLTLSQI 360
  361 YEWMVKSVPY FKDKGDSNSS AGWKNSIRHN LSLHSKFIRV QNEGTGKSSW WMLNPEGGKS 420
  421 GKSPRRRAAS MDNNSKFAKS RSRAAKKKAS LQSGQEGAGD SPGSQFSKWP ASPGSHSNDD 480
  481 FDNWSTFRPR TSSNASTISG RLSPIMTEQD DLGEGDVHSM VYPPSAAKMA STLPSLSEIS 540
  541 NPENMENLLD NLNLLSSPTS LTVSTQSSPG TMMQQTPCYS FAPPNTSLNS PSPNYQKYTY 600
  601 GQSSMSPLPQ MPIQTLQDNK SSYGGMSQYN CAPGLLKELL TSDSPPHNDI MTPVDPGVAQ 660
  661 PNSRVLGQNV MMGPNSVMST YGSQASHNKM MNPSSHTHPG HAQQTSAVNG RPLPHTVSTM 720
  721 PHTSGMNRLT QVKTPVQVPL PHPMQMSALG GYSSVSSCNG YGRMGLLHQE KLPSDLDGMF 780
  781 IERLDCDMES IIRNDLMDGD TLDFNFDNVL PNQSFPHSVK TTTHSWVSG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle