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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114654191
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.83
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTLHSVFF TLKVSILLGS LLGLCLGLEF MGLPNQWARY LRWDASTRSD LSFQFKTNVS  60
   61 TGLLLYLDDG GVCDFLCLSL VDGRVQLRFS MDCAETAVLS NKQVNDSSWH FLMVSRDRLR 120
  121 TVLMLDGEGQ SGELQPQRPY MDVVSDLFLG GVPTDIRPSA LTLDGVQAMP GFKGLILDLK 180
  181 YGNSEPRLLG SRGVQMDAEG PCGERPCENG GICFLLDGHP TCDCSTTGYG GKLCSEDVSQ 240
  241 DPGLSHLMMS EQGVSQGFGL SHLMLSEQAR EENVATFRGS EYLCYDLSQN PIQSSSDEIT 300
  301 LSFKTWQRNG LILHTGKSAD YVNLALKDGA VSLVINLGSG AFEAIVEPVN GKFNDNAWHD 360
  361 VKVTRNLRQV TISVDGILTT TGYTQEDYTM LGSDDFFYVG GSPSTADLPG SPVSNNFMGC 420
  421 LKEVVYKNND IRLELSRLAR IADTKMKIYG EVVFKCENVA TLDPINFETP EAYISLPKWN 480
  481 TKRMGSISFD FRTTEPNGLI LFTHGKPQER KDARSQKNTK VDFFAVELLD GNLYLLLDMG 540
  541 SGTIKVKATQ KKANDGEWYH VDIQRDGRSG TISVNSRRTP FTASGESEIL DLEGDMYLGG 600
  601 LPENRAGLIL PTELWTAMLN YGYVGCIRDL FIDGRSKNIR QLAEMQNAAG VKSSCSRMSA 660
  661 KQCDSYPCKN NAVCKDGWNR FICDCTGTGY WGRTCEREAS ILSYDGSMYM KIIMPMVMHT 720
  721 EAEDVSFRFM SQRAYGLLVA TTSRDSADTL RLELDGGRVK LMVNLDCIRI NCNSSKGPET 780
  781 LYAGQKLNDN EWHTVRVVRR GKSLKLTVDD DVAEGTMVGD HTRLEFHNIE TGIMTEKRYI 840
  841 SVVPSSFIGH LQSLMFNGLL YIDLCKNGDI DYCELKARFG LRNIIADPVT FKTKSSYLSL 900
  901 ATLQAYTSMH LFFQFKTTSP DGFILFNSGD GNDFIAVELV KGYIHYVFDL GNGPNVIKGN 960
  961 SDRPLNDNQW HNVVITRDNS NTHSLKVDTK VVTQVINGAK NLDLKGDLYM AGLAQGMYSN1020
 1021 LPKLVASRDG FQGCLASVDL NGRLPDLIND ALHRSGQIER GCEGPSTTCQ EDSCANQGVC1080
 1081 MQQWEGFTCD CSMTSYSGNQ CNDPGATYIF GKSGGLILYT WPANDRPSTR SDRLAVGFST1140
 1141 TVKDGILVRI DSAPGLGDFL QLHIEQGKIG VVFNIGTVDI SIKEERTPVN DGKYHVVRFT1200
 1201 RNGGNATLQV DNWPVNEHYP TGNTDNERFQ MVKQKIPFKY NRPVEEWLQE KGRQLTIFNT1260
 1261 QAQIAIGGKD KGRLFQGQLS GLYYDGLKVL NMAAENNPNI KINGSVRLVG EVPSILGTTQ1320
 1321 TTSMPPEMST TVMETTTTMA TTTTRKNRST ASIQPTSDDL VSSAECSSDD EDFVECEPST1380
 1381 DKSLSTSIFE GGYKAHAPKW ESKDFRPNKV SETSRTTTTS LSPELIRFTA SSSSGMVPKL1440
 1441 PAGKMNNRDL KPQPDIVLLP LPTAYELDST KLKSPLITSP MFRNVPTANP TEPGIRRVPG1500
 1501 ASEVIRESSS TTGMVVGIVA AAALCILILL YAMYKYRNRD EGSYQVDETR NYISNSAQSN1560
 1561 GTLMKEKQQS SKSGHKKQKN KDREYYV

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