YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114662992
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSGEELDGF EGEASSTSMI SGASSPYQPT TEPVSQRRGL AGLRCDPDYL RGALGRLKVA  60
   61 QVILALIAFI CIETIMACSP CEGLYFFEFV SCSAFVVTGV LLIMFSLNLH MRIPQINWNL 120
  121 TDLVNTGLSA FLFFIASIVL AALNHRAGAE IAAVIFGFLA TAAYAVNTFL AVQKWRVSVR 180
  181 QQSTNDYIRA RTESRDVDSR PEIQRLDTFS YSTNVTVRKK SPTNPLSLNH WQLA

Type	Start	End	Confidence
Cytoplasmic	1	58	0.98
Transmembrane Helix	59	78	0.94
Non-Cytoplasmic	79	84	0.78
Transmembrane Helix	85	109	0.87
Cytoplasmic	110	122	0.82
Transmembrane Helix	123	143	0.94
Non-Cytoplasmic	144	150	0.79
Transmembrane Helix	151	171	0.95
Cytoplasmic	172	234	0.98