YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114668291
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAGSSSYWE DLRKQARQLE NELDLKLVSF SKLCTSYSHS STRDGRRDSS DTTPLLNGSS  60
   61 QDRMFETMAI EIEQLLARLT GVNDKMAEYT NSAGVPSLNA ALMHTLQRHR DILQDYTHEF 120
  121 HKTKANFMAI RERENLMGSV RKDIESYKSG SGVNNRRTEL FLKEHDHLRN SDRLIEETIS 180
  181 IAMATKENMT SQRGMLKSIH SKMNTLANRF PAVNSLIQRI NLRKRRDSLI LGGVIGICTI 240
  241 LLLLYAFH

Type	Start	End	Confidence
Cytoplasmic	1	227	0.94
Transmembrane Helix	228	247	0.96
Non-Cytoplasmic	248	248	0.95