YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114683988
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYLEVCLGS SSCSSGTLMP RMILSNTTAV TPFLTKLWQE TVQQGGNMSG LARRSPRSDD  60
   61 GKLEALYVLM VLGFFGFFTL GIMLSYIRSK KLEHSNDPFN VYIESDAWQE KDKAYVQARV 120
  121 LESYRACYVV ENHLAVEQPN THLPEMKPSP

Type	Start	End	Confidence
Cytoplasmic	1	62	0.64
Transmembrane Helix	63	87	0.87
Non-Cytoplasmic	88	150	0.60