YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114686814
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLEGCGRAA VEGQPPGFGS RAGSRAADTK PPGWLTDAAS IAAARGEMSE VRPLSRDILM  60
   61 ETLLYEQLLE PPTMEVLGVT DSEEDLDPME DFDSLECMEG SDALALRLAC IGDEMDVSLR 120
  121 APRLAQLSDV AMHSLGLAFI YDQTEDIRDV LRSFMDGFTT LKENIMRFWR SPNPGSWVLL 180
  181 ALLLLLALLL PLLSGGLHLL LK

Type	Start	End	Confidence
Cytoplasmic	1	175	0.78
Transmembrane Helix	176	199	0.90
Non-Cytoplasmic	200	202	0.65