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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114687087
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPGAPAIPE QAAADTSVTF SLHLAIFSSN ATILTRLWGP PGSQTFEQPS PHRNPAAPCN  60
   61 SHRGRCRPTP RMAEAHQAVA FQFTVTPDGV DFRLSREALK HVYLSGINSW KKRLIRIKNG 120
  121 ILRGVYPGSP TSWLVVIMAT VGSSFCNVDV SLGLVSCIQR CLPQGCGPYQ TPQTRALLSM 180
  181 AIFSTGVWVT GIFFFRQTLK LLLCYHGWMF EMHGKTSNLT RIWAMCIRLL SSRHPMLYTF 240
  241 QTSLPKLPVP RVSATIQRYL ESVRPLLDDE EYYRMELLAK EFQDKTAPRL QKYLVLKSWW 300
  301 ASNYVSDWWE EYIYLRGRSP LMVNSNYYVM DLVLIKNTDV QAARLGNIIH AMIMYRRKLD 360
  361 REEIKPVMAL GIVPMCSYQM ERMFNTTRIP GKDTDVLQHL SDSRHVAVYH KGRFFKLWLY 420
  421 EGARLLKPQD LEMQFQRILD DPSPPQPGEE KLAALTAGGR VEWAQARQAF FSSGKNKAAL 480
  481 EAIERAAFFV ALDEESYCYD PEDEASLSLY GKALLHGNCY NRWFDKSFTL ISFKNGQLGL 540
  541 NAEHAWADAP IIGHLWEFVL GTDSFHLGYT ETGHCLGKPN PALAPPTRLQ WDIPKQCQAV 600
  601 IESSYQVAKA LADDVELYCF QFLPFGKGLI KKCRTSPDAF VQIALQLAHF RDRGKFCLTY 660
  661 EASMTRMFRE GRTETVRSCT SESTAFVQAM MEGSHTKADL RDLFQKAAKK HQNMYRLAMT 720
  721 GAGIDRHLFC LYLVSKYLGV SSPFLAEVLS EPWRLSTSQI PQSQIHMFDP EQHPNHLGAG 780
  781 GGFGPVADDG YGVSYMIAGE NTIFFHISSK FSSSETNAQR FGNHIRKALL DIADLFQVPK 840
  841 AYS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle