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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|162675316, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPQKFDFVD WWSKEVRRGT PVVVKMENPN YSMLEIESPK SSFEDQKDKE KNAKQLTWVL  60
   61 LLKAHRAAGC VAWVWSGVMI LLAAIKKRLI LGQGLAQQDK PHKGKLFKAI TGFLVFAVMM 120
  121 LCVEVAAHAL SWHFSTPHWP SSFRIQDLPH VVYVGWMYFR ASYIAPTLQK LTDFCIWLFL 180
  181 IQSVDRIVLF LGCVYIRWKG LKPVPINPSL ESDDAENPDS GHPMVLVQIP MCNEREVYEQ 240
  241 SISAVCQLDW PKSRILIQVL DDSSDVETRF LIKSEVSKWQ QKGVNIVYRH RVNRTGYKAG 300
  301 NMKSAMQCDY VKKYEFVAIF DADFQPKSDF LKRTVPHFRD NPELALVQTR WSFVNKDENL 360
  361 LTRLQNINLS FHFEVEQQVN GIFINFFGFN GTAGVWRITA LEESGGWLER TTVEDMDIAV 420
  421 RAHLQGWKFI FLNDVRCLCE LPESYEAYRK QQHRWHSGPM QLFRLCFPDI IKAKISWMKK 480
  481 ANMIFLFFLL RKLILPFYSF TLFCIILPLT MFVPEATLPV WVVCYIPALM SILNVIPSPK 540
  541 SFPFLVPYLL FENTMSVTKF NAMISGLFQL SSAHEWVVTK KTGRASEGDV LEKDTARSTV 600
  601 ALDKTMSESG IDALKTLDVK LDPLVPPSVH DALQPPMKKK NRLYRKELLL SFLLLTAAAR 660
  661 SLLSAQGIHF YFLLFQGISF LVVGLDLIGE QVS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle