YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115255450, gi...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDIDHAAPR RRLPVFTGIL VLIALAILIS LGTWQVERLH WKEGLIADIA ARQAASPVPL  60
   61 ADIEAMAAAG GDIEYRKVTA SGRYINNKER HFFATWRGQT GYYIYTPLEL ADGRILFVNR 120
  121 GFVPYDNKEP ETRMQGQLTD QQTVTGLARE KLPGKPSWVV PDNDVAKNIF YWKDLDVMAE 180
  181 SVGLEKASVI PFFVDADSTL NPAGLPIGGV TQVDLPNDHL QYAFTWYGLA AVLLVVVAIS 240
  241 WFRKGAKTPQ Q

Type	Start	End	Confidence
Cytoplasmic	1	12	0.89
Transmembrane Helix	13	34	0.89
Non-Cytoplasmic	35	222	0.94
Transmembrane Helix	223	242	0.95
Cytoplasmic	243	251	0.87