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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|452194, gi|74...
Protein type: Transmembrane
Type Confidence: 0.54
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHVSLAEALE VRGGPLQEEE IWAVLNQSAE SLQELFRKVS LADPAALGFI ISPWSLLLLP  60
   61 SGSVSFTDEN ISNQDLRAFT APEVLQNQSL TSLSDVEKIH IYSLGMTLYW GADYEVPQSQ 120
  121 PIKLGDHLNS ILLGMCEDVI YARVSVRTVL DACSAHIRNS NCAPSFSYVK HLVKLVLGNL 180
  181 SGTDQLSCNS EQKPDRSQAI RDRLRGKGLP TGRSSTSDVL DIQKPPLSHQ TFLNKGLSKS 240
  241 MGFLSIKDTQ DENYFKDILS DNSGREDSEN TFSPYQFKTS GPEKKPIPGI DVLSKKKIWA 300
  301 SSMDLLCTAD RDFSSGETAT YRRCHPEAVT VRTSTTPRKK EARYSDGSIA LDIFGPQKMD 360
  361 PIYHTRELPT SSAISSALDR IRERQKKLQV LREAMNVEEP VRRYKTYHGD VFSTSSESPS 420
  421 IISSESDFRQ VRRSEASKRF ESSSGLPGVD ETLSQGQSQR PSRQYETPFE GNLINQEIML 480
  481 KRQEEELMQL QAKMALRQSR LSLYPGDTIK ASMLDITRDP LREIALETAM TQRKLRNFFG 540
  541 PEFVKMTIEP FISLDLPRSI LTKKGKNEDN RRKVNIMLLN GQRLELTCDT KTICKDVFDM 600
  601 VVAHIGLVEH HLFALATLKD NEYFFVDPDL KLTKVAPEGW KEEPKKKTKA TVNFTLFFRI 660
  661 KFFMDDVSLI QHTLTCHQYY LQLRKDILEE RMHCDDETSL LLASLALQAE YGDYQPEVHG 720
  721 VSYFRMEHYL PARVMEKLDL SYIKEELPKL HNTYVGASEK ETELEFLKVC QRLTEYGVHF 780
  781 HRVHPEKKSQ TGILLGVCSK GVLVFEVHNG VRTLVLRFPW RETKKISFSK KKITLQNTSD 840
  841 GIKHGFQTDN SKICQYLLHL CSYQHKFQLQ MRARQSNQDA QDIDVLHKRW SIVSSPEREI 900
  901 TLVNLKKDAK YGLGFQIIGG EKMGRLDLGI FISSVAPGGP ADLDGCLKPG DRLISVNSVS 960
  961 LEGVSHHAAI EILQNAPEDV TLVISQPKEK ISKVPSTPVH LTNEMKNYMK KSSYMQDSAI1020
 1021 DSSSKDHHWS RGTLRHISEN SFGPSGGLRE GSLSSQDSRT ESASLSQSQV NGFFASHLGD1080
 1081 QTWQESQHGS PSPSVISKAT EKETFTDSNQ SKTKKPGISD VTDYSDRGDS DMDEATYSSS1140
 1141 QDHQTPKQES SSSVNTSNKM NFKTFSSSPP KPGDIFEVEL AKNDNSLGIS VTGGVNTSVR1200
 1201 HGGIYVKAVI PQGAAESDGR IHKGDRVLAV NGVSLEGATH KQAVETLRNT GQVVHLLLEK1260
 1261 GQSPTSKEHV PVTPQCTLSD QNAQGQGPEK VKKTTQVKDY SFVTEENTFE VKLFKNSSGL1320
 1321 GFSFSREDNL IPEQINASIV RVKKLFPGQP AAESGKIDVG DVILKVNGAS LKGLSQQEVI1380
 1381 SALRGTAPEV FLLLCRPPPG VLPEIDTALL TPLQSPAQVL PNSSKDSSQP SCVEQSTSSD1440
 1441 ENEMSDKSKK QCKSPSRRDS YSDSSGSGED DLVTAPANIS NSTWSSALHQ TLSNMVSQAQ1500
 1501 SHHEAPKSQE DTICTMFYYP QKIPNKPEFE DSNPSPLPPD MAPGQSYQPQ SESASSSSMD1560
 1561 KYHIHHISEP TRQENWTPLK NDLENHLEDF ELEVELLITL IKSEKGSLGF TVTKGNQRIG1620
 1621 CYVHDVIQDP AKSDGRLKPG DRLIKVNDTD VTNMTHTDAV NLLRAASKTV RLVIGRVLEL1680
 1681 PRIPMLPHLL PDITLTCNKE ELGFSLCGGH DSLYQVVYIS DINPRSVAAI EGNLQLLDVI1740
 1741 HYVNGVSTQG MTLEEVNRAL DMSLPSLVLK ATRNDLPVVP SSKRSAVSAP KSTKGNGSYS1800
 1801 VGSCSQPALT PNDSFSTVAG EEINEISYPK GKCSTYQIKG SPNLTLPKES YIQEDDIYDD1860
 1861 SQEAEVIQSL LDVVDEEAQN LLNENNAAGY SCGPGTLKMN GKLSEERTED TDCDGSPLPE1920
 1921 YFTEATKMNG CEEYCEEKVK SESLIQKPQE KKTDDDEITW GNDELPIERT NHEDSDKDHS1980
 1981 FLTNDELAVL PVVKVLPSGK YTGANLKSVI RVLRGLLDQG IPSKELENLQ ELKPLDQCLI2040
 2041 GQTKENRRKN RYKNILPYDA TRVPLGDEGG YINASFIKIP VGKEEFVYIA CQGPLPTTVG2100
 2101 DFWQMIWEQK STVIAMMTQE VEGEKIKCQR YWPNILGKTT MVSNRLRLAL VRMQQLKGFV2160
 2161 VRAMTLEDIQ TREVRHISHL NFTAWPDHDT PSQPDDLLTF ISYMRHIHRS GPIITHCSAG2220
 2221 IGRSGTLICI DVVLGLISQD LDFDISDLVR CMRLQRHGMV QTEDQYIFCY QVILYVLTRL2280
 2281 QAEEEQKQQP QLLK

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