YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SELT_CHICK
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAAGLGLGI GLLLLAALAG PGGSAEQGGV PAKKLRMAYA TGPLLKFQIC VSCGYRRVFE  60
   61 EYMRVISQRY PDIRIEGENY LPQPIYRHIA SFLSVFKLVL IGLIIVGKDP FAFFGMQAPS 120
  121 IWQWGQENKV YACMMVFFLS NMIENQCMST GAFEITLNDV PVWSKLESGH LPSMQQLVQI 180
  181 LDNEMKLNVH MESMPHHRS

Type	Start	End	Confidence
Signal Peptide	1	25	0.98
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	199	0.96