YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|117626623, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQPQVLLMR MRPSRFSINN LPRFRDVITG RDAHPCAIKI TMKRKRLFLL ASLLPMFALA  60
   61 GNKWNTTLPG GNMQFQGVII AEACRIEAGD KQMTVNMGQI SSNRFHAVGE DSSPVPFVIH 120
  121 LRECSTVVSE RVGVAFHGVA DGKNPDVLSV GEGPGIATNI GVALFDDEGN LVPINRPPAN 180
  181 WKRLYSGSTS LHFIAKYRAT GRRVTGGIAN AQAWFSLTYQ

Type	Start	End	Confidence
Signal Peptide	1	60	0.59
N-region	1	51
H-region	52	57
C-region	58	60
Cleavage Site	60	61
Non-Cytoplasmic	61	220	0.98