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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115529115
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FMVETGHIQL LQITYPHTHS RFRMYERAHF AAFLLALVLF QRAESCDPRP MLVQVPNTVP  60
   61 AGYFITQVTL NGCTAIPVSF TSSDPDFTVN TDGSIVTLRS LVISTKRFSV LVQDNSGLDW 120
  121 RVEIILSCKN EDSQKSGSVA QKRAKRRWRP LPFSVVENAS PPFPKDVEMI ASDSSVNYTV 180
  181 HYVISGQGVT EEPIGLFQLD QKTGMVRVTG PVDREKNPEF NFIARAFDQN NREVDQFLPI 240
  241 TVMVEDVNDN APEFTGNRFF TVEERCRAGT RVGQVNATDR DQPKTPHSLI KYILLNATDM 300
  301 FSIDQSTGII TAKSNTLDRE AQDKVFVGVE IRDMGGAPNG LFNRGTAVIS LTDVNDNPPT 360
  361 FKEKLYKGTI KENLANVLVT RIPVEDKDLV NTPNWKAVYE VTKGNENGNF RMETDPKTNE 420
  421 GLLYVVKGLD FEKTPVMNLE VTARNEAPLV GTDAKWQSVP LQLNVEDVDE GPEFNPNIMY 480
  481 LKVKENLPNG TVIGTYKALD PETKNSNGIK YYKLTDPGNW ITVVESTGEL KVANTIDRES 540
  541 SLVHNDTYNI TIKAVDESKK TGNGVVILQI EDVNDNIPVI QRPDLNMCNR GDAVSSVLVE 600
  601 TVDQDKPPYS TPFIFELGAE QEGKWKLKDI TDSSAVLQQV EPMPNGMYTV PITVKDLQGT 660
  661 GKEQIVNVRV CSCQREDSGV GICGARSASV SLGNYGILAL VLSGLLLLLL CLFLIFFCTT 720
  721 KRDKLQITDD TGTGGILLKS NTEAPGEEVK DGTLLLIPTA DVVDGSFQSA VTESKNVNTA 780
  781 PGRYGQQFFQ SGGVYNTTTQ EFGTDQYYTS GRYDNKIYGN GTLQKFSNTG TLDTWRTNGC 840
  841 YLDRKLAYFG EQEDGRYADD LLKNYGNEGV GSSAGSVGCC SILGEQESME FLNTLGPKFR 900
  901 PLADICYTTN KTGK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle