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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115944493, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTPHSENAV SSIRNSEKLT VIEEGAFSKS QLILIELENL PLQMPLPNIF GELPRLTQLN  60
   61 LERNNIETVP DYAFRGSTIE SLSLAYNPIS VLEEKAFAEF EGPENLSLEN TDISYLPTTG 120
  121 LKYLIELNIE GTDKLAVFPP IFRFERIRVA KLNYFSHCCA FNYQTKENYG NVNKQNVTTK 180
  181 IRTTSCPSTT MPTITSRGIE VIGFGDGAFV LSGTDTTIQR GSDIDDYGQS LFGQFQGTNM 240
  241 QKESLPNSAF DPRELNGSII EESIPGQKPP GAEEEGGFNP VVINPNVSYN HNGSKCDGDL 300
  301 VTTDYSDVQC TPQPNAFHPC TDVMGYVFLR VMVWFVSGTA LVGNFIVLVV LASQRHKMTV 360
  361 PKFLMCNLSL ADLCMGLYLL IVASVDVHTA GEYFNYSIQW QYGAGCSVAG FISMLSSELS 420
  421 VFSLTVITIE RWYTIIYAID LNKRIRLRLA GRIMIVGWIF SILIAVLPLF KVGNYGITSM 480
  481 CLPFYIENRK DTVTIAYVVV ILFVNTIAFA VICACYVKMY LTVRNPHTVM QRKDSKVAKR 540
  541 MAVLVFTDFA CWAPMALFGL SGAFGHHLLT TNQSKIFIVL FYPINSCANP FLYAIFTKAF 600
  601 RRDLYLLLYK HGMCEKQAMK YHPTASSAQR SVSQINSTAH DNRVKQYHRD SSGSVLTGIT 660
  661 SDNQSSVAYE KDFISNSNGS PQHSMKANSN AIPMVPFREE RSRDEDAQRH QSNDRESNDR 720
  721 QSNNHQSTAA EKHQSFVKRV SVTFEVSIEG LETVPEEVDQ NDNYDGQYEP TVSFYQRDTR 780
  781 NTNEESYKEK HYLLPQVVQS YHSDDEDVHP TEAAERNRNN CGLTLTPHQD YNHAADSEDA 840
  841 FRKNSRADSG IQSNNTTPTE KEGTQKPLEL HLIPCSTDHE TVL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle