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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115975476, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLANRRLVV ILLVLYNVVS LCRAQYHGKL VGTFTDKSTH DIAGTVYAED ETTLRIIGFR  60
   61 YDGAGPDAFI WAGESGVPSD DGFIIPDEEG RTVKLEAYDN VDIRVTLPAG KTVSSLAWIS 120
  121 VWCREFGANF GDLTVPANFI APAPLNLGTL GFTPRVHNTY ASAVIILNAK QIRVENLVYD 180
  181 GQGPRAFFWV GPEGTPNNNG DYAIPDETGS TGVISAYNGE TITLTFPEGT DIFDIGHFGL 240
  241 WCIAFTQDFG HVDIPSQAEL NIPPAPLTAG GGGPTRLMFP NCETLVEDEL QVSWMINGTD 300
  301 IVIRLSSTNV VGDYAAFGLS GSPTGTLMVG GDVVVTFKDD MENYYAIDYY LQGQSQCSPQ 360
  361 NGGGACPDTI SSAQDGNNNA ELVESYYEEN GVVTNIVYRR PLNASDATYD KAFTTDGPIY 420
  421 VIWARGPINR DGRVAYHNVR RSLKSSNLQI DFGRPNSTCP PLGQNATVPP VTDGWVIPGI 480
  481 EELETATFTV EMGLSGGSKG YEYITGRVGW GIAWFINGQL IPELTLRRNV TYTFLVSGGD 540
  541 DPVASGNYHP FYITDDVNGG YAQLTEAERQ GITIYAGPNE GPLCQYMSSA DPNSYSTFED 600
  601 YKTTLTKDCA PGDPGVLEWT VPLDAPDLLY YQCYTHRFLG WKIHVTDSAT AVTDSATTVT 660
  661 DSATNVTDSA TTVSLSVFSI VLLYLLYLIL QESSTGQSEV VLDCCPGWRQ IGNECPEPCG 720
  721 SGTWGRSCAK VCSCPENTNC NNVNGACTCP PGLQGAQCEQ ACDRGRFGAG CTGVCGCMNE 780
  781 ASCDVVTGTC ECRPGWMGES CDVACEQGFV GVEILVLQDS TAKGAFSDVP VNTTGNATLL 840
  841 MGLVPAAQDG WERNVCRCAL GVGTVRAVLL NAYATMEQGA ATWTGLVSVG LDGKVGSVTL 900
  901 PASQDGTVLV AKDPVGVNTV EDVTIRLVSV TVLQAGQDDS AILRVQRDIM AKNVAISVAV 960
  961 RMGSVTTSQG SALALEDGEE SVVKCHAQKV TTEGIVEVAV CV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle