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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116308867
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAASAAAAA APPADPPDSS PAASSPPRPS PEELVARAVA PVKPAFLRPP PVRDAPKDEG  60
   61 KANDGGAVVA EKKSKRQLKR ERKQEQKSSS HLCIEVGKSG NVSSCKYGDS CRFSHDIDAY 120
  121 LAQKPADLEG TCPFTNLDQL CPYGLTCRFL GTHKDIHAAS GNLSEKHEIN ALNKDIQKLL 180
  181 WKNKYKFPKA SAQIKLLGLK EVIKSKPDAA NDDKKVNHDN LDGNDDENKE PLCNPPVNAE 240
  241 CDSTLCEELD RSEGEPLIDN SIPCVEPRPT KKSKVESDEI DKHGAGTLNT NTESEDPNLS 300
  301 NGLEPSNNAS SCRTDLITTP HLREKKIIDF REKLYLAPLT TVGNLPFRRL CKTLGADITC 360
  361 GEMAMCTNLL QGQASEWALL RRHSSEDLFG VQICGAYPDT VARTVELVDN ECSVDFIDIN 420
  421 MGCPIDIVVN KGAGSSLLTK PMRIKSIVQA ASTVTEKPLT VKVRTAFFEG RNRADSIVSD 480
  481 IYDWGASAIT VHGRSRQQRY SKLADWDYIY QCAQKAPDQL HVVGNGDVFS FTDWNKHVSG 540
  541 CSKISTCMIA RGALIKPWIF TEVKEQRHWD ITSGERFNIL KDFVTFGLEH WGSDSKGVET 600
  601 TRYFLLEWLS YTCRYIPVGL LDVIPQRLNW RPPSYCGRDD LETLMISDSA ADWIRISEML 660
  661 LGKVPEGFTF TPKHKSNAYD RAENG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle