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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|26352021, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGFWVLCFV LFPSSLSYPE SWMPLVNLTH HILRDTNSSL FSNCWVCLST QTQRSLAVPA  60
   61 PLSIWTDTPM KLHLTYSVRP FSGSFSISDI ERRLRLFRPL TASYSFHNPD RRAIAFLQLV 120
  121 SSTGIFRIIT RITSVIYPHK DRFFESAQRP LWGPLFTETV LRSQAPLCIS RFFKVSAYAT 180
  181 FVGNLSASLC NYTMHISPST SHENLDLSTT HTFKQAMKRP DAKWKNPLRF SGPPSLIFSK 240
  241 PAYYPCPTDI KHCHTSPATP WMHCPQAPFG TCYNLTLFEP DNSTHPVTMS VNPTHFKVKL 300
  301 QGHRDPYPLS HYQPLTGAAL SGQYSVWENE ITVQENWDIT SNIFSHLLSF SYAFCLNSSG 360
  361 VFFLCGTSTY ICLPANWSGV CTLVFQYPDI ELLPNNQTVP VPLFASVLSS DSVLRPKRSP 420
  421 HLFPFLAGLG ISSALGTGIA GLATSTLYFQ QLSKVLSETL EEIAASITTL QNQIDSLAGV 480
  481 VLQNRRALDL ITAEKGGTCL FLQEECCFYV NQSGIVRDAA RKLQERASEL GQHSDSWGQW 540
  541 PDLGRWLPWL TPFLGPLLFL FFLLTFGSCL LNCLTRFVSQ RLGSFVQDTA KRHVDSILQN 600
  601 FQYKKLPQDS PDEDTIPT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle