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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|17467263, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGDEVSITR REMLPSAPDG IKTPMTTIRF PKAKTLQILT LLISIGVVQT SPMPHEPHNL  60
   61 TWVITNTATG TVINSTSRLA PIGTWFPDLV FDLCALADGT WDPLGLVWGC QHPAQHSELR 120
  121 RTPFYVCPGE GRSPQQTATC GGPESYFCAY WGCESTGSIS WTPPIKDDLI KVQRSPGSES 180
  181 QGWGYGLQPK LDANDLGGPC SSNCNPITVQ FTPKGKESVG WEKGKTWGLR LYVSGYDYGV 240
  241 MFTIQLSARQ GMPLGPNPAL PPVGLTVTQS QITVPISQEL RPRSGPWDLL KATYLVLNNS 300
  301 KPELTSKCWL CLDAQPPYYE GIAVPGNYTT STDNKDCRWQ YPGKGRLTLE LIQGKGLCFG 360
  361 TIPHTHRHLC NSIQEAPDRD AYIIPPINTW WACTTGLTSC IHTQALNLTN GFCVLVQLAP 420
  421 RILRYSDEMG TRLSPFPAAR AKRATVAEIL GASAFDFQDE NYKVLSSAID ADLMELGKSL 480
  481 SKSKTSLTSL REATLRNQRE QDFQSLQQDG LCKPLEKRCC TFVDNLKHAR ELLAKVRKRL 540
  541 EDRKREMEQG QPVWITVIAT LSGFLGLVIL IVICKLYVVN PLMDSSRTRS PPSDTY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle