YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MMAA_MOUSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTISTLLLSP NRRLLTCLSR VPSPWLLHSS HPAPGPPGAL PNCFGHHCTK RVLLSDGFRR  60
   61 TLCVQATLKD HTEGLSDKEQ RFVDRLYTGL VKGQRACLAE AITLVESTHT RKRELAQVLL 120
  121 QRVLALQREQ ELRNQGKPLT FRVGLSGPPG AGKSTFIECF GKMLTEQGHR LSVLAVDPSS 180
  181 CTSGGSLLGD KTRMIELSRD MNAYIRPSPT SGTLGGVTRT TNEAIVLCEG GGYDIILIET 240
  241 VGVGQSEFAV ADMVDMFVLL LPPAGGDELQ GIKRGIIEMA DLVVITKSDG DLIVPARRIQ 300
  301 AEYVSALKLL RRRSEVWRPK VIRISARSGE GITEMWDTMR EFQHQMLASG ELAAKRQTQH 360
  361 KVWMWNLIQE NVLEHFKTHP SIREQIPLME RKVLSGALSP GRAADLLLKA FKSRH

Type	Start	End	Confidence
Signal Peptide	1	29	0.72
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	415	0.99