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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: HA18_MOUSE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.72
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALTMLLLLV AAALTLIETR AGPHSLRYFH TAVSWPGLVE PRFIIVGYVD DTQFVRFDSD  60
   61 AENPRMEPRA RWMEQEGPEY WERETQKAKG HEESFRVSLR TAQRYYNQSK GGSHTLQWMY 120
  121 GCDVGSDERL LRGYLQFAYE GRDYIALNED LKTWTAADMA AQITLHKWEQ AGIAERDRAY 180
  181 LEGACVQSLR RYLQLRKETL LCTDPPKAHV THHPRSYGAV TLRCWALGFY PADITLTWQL 240
  241 NGEELTQDME LVETRPAGDG TFQKWASVVV PLGKEQNYTC HVNHEGLPEP LTLRWEPPPS 300
  301 TVSNMANVAI LVVLVAWPSL ELWWIL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle