YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	VTI1B_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASAASSEH FEKLHEIFRG LLEDLQGVPE RLLGTAGTEE KKKLVRDFDE NQQEANETLA  60
   61 EMEEELRYAP LTFRNPMMSK LRNYRKDLAK LHREVRSTPL TAAPGGRGDL KYGTYTLENE 120
  121 HLNRLQSQRA LLLQGTESLN RATQSIERSH RIATETDQIG TEIIEELGEQ RDQLERTKSR 180
  181 LVNTNENLSK SRKILRSMSR KVITNKLLLS VIILLELAIL VGLVYYKFFR HH

Type	Start	End	Confidence
Cytoplasmic	1	201	0.90
Transmembrane Helix	202	226	0.87
Non-Cytoplasmic	227	232	0.80