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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|123702962, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNKQSELKK EGYTVVSEDP QMMKVKDKNG DQFVIKALKA DQDKVSDFLL QLNYPHIVHH  60
   61 KQVIRDGDRL YLVLEHCEGG DLAQKIKLKT ETMDGFSEAE IVDWTAKMCM ALKYLHDQQI 120
  121 LHKNLQPKSV FFTACGAIRL GEFGAINEWS IDVEKAETKD LLYVPPEILS GKPYDEKSEV 180
  181 WSLGCIIYEM CMLKCGFRGK NTVETISKIL TSSYEDLPET FSEDLRELVK DTLQVDPANR 240
  241 PSVSEILTRP FMIKHLHKKS TKTIEELYKT LDVLEELAAG LEKVHYNTTV SSLTGGVIGL 300
  301 AGGITSVVGA ILAPFTFGAS LIVTGVGIGV SVAGGVTAGV SNVTKMVNQR SNRQNIKMII 360
  361 TELQEKITST NCCIQNIQIA VDKQETEFPE SNQSQSNVHS GEEDDESTMA SAGARLGRGL 420
  421 GGIPELVRLT QAATVGKVAA QTARAVRVAE VATGVISGLF VAVDIFFIAL DSKEIHKLRK 480
  481 DNASIEIQQE SENAANNTEF KSSQTQLEEP ELTNDKSEQS DTKKLTTPTK KEQELQSEIM 540
  541 KFVRKIRETK GELRTILDEL KDELEKVKPE IPNLDDGEPF LRSCSSSVFN 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle