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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: JPH1_MOUSE
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGGRFDFDD GGTYCGGWEE GKAHGHGICT GPKGQGEYSG SWSHGFEVVG VYTWPSGNTY  60
   61 QGYWAQGKRH GLGVETKGKW MYRGEWSHGF KGRYGVRQSL CTPARYEGTW SNGLQDGYGV 120
  121 ETYGDGGTYQ GQWAGGMRHG YGVRQSVPYG MATVIRSPLR TSLASLRSEQ SNGSVLHEAA 180
  181 AAAADSPAGT RGGFVLNFHA DTELGKKKGG LFRRGSLLGS MKLRKSESKS SISSKRSSVR 240
  241 SDAAMSRISS SDANSTISFG DVDCDFCPVE DHVDATTTET YMGEWKNDKR NGFGISERSN 300
  301 GMKYEGEWAN NKRHGYGCTV FPDGSKEEGK YKNNILVRGI RKQLIPIRNT KTREKVDRAI 360
  361 EGAQRAAAMA RTKVEIANSR TAHARAKADA ADQAALAARQ ECDIARAVAR ELSPDFYQPG 420
  421 PDYIKQRCQE GGDIKENPEE KVLEKPPSPK ESPHFYRKGT TPPRSPESSP KQSHSPQPSS 480
  481 PEPSKKQNPS PGARLSQDKQ SLAEEQVTAF VNKPSMSKAP AKELGASVSK YSGRHHVPNP 540
  541 SNGELHSQYH GYYVKLNTPQ HPPEDREDDR GVSQSSSALV PRPSPNKWGP PKSVTKPVAK 600
  601 ESKTEPKAKK SELAIPKNPA SNDTCPSLEK EANSGPNSIM IVLVMLLNIG LAILFVHFLT 660
  661 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle