YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PLPP2_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERRWVFVLL DVLCVLVASL PFIILTLVNA PYKRGFYCGD DSIRYPYRPD TITHGLMAGV  60
   61 IITATVILVS LGEAYLVYTD RLYSRSNFNN YVAAIYKVLG TFLFGAAVSQ SLTDLAKYMI 120
  121 GRLRPSFLAV CDPDWSQVNC SGYVQLEVCR GSPANVTEAR LSFYSGHSSF GMYCMLFLAL 180
  181 YVQARLCWKW ARLLRPTVQF FLVAFAIYVG YTRVSDHKHH WSDVLVGLLQ GALVACLTVR 240
  241 YVSDFFKSRP PQPCQEDEVP ERKPSLSLTL TLGDRP

Type	Start	End	Confidence
Cytoplasmic	1	6	0.91
Transmembrane Helix	7	28	0.93
Non-Cytoplasmic	29	54	0.90
Transmembrane Helix	55	77	0.90
Cytoplasmic	78	92	0.78
Transmembrane Helix	93	112	0.87
Non-Cytoplasmic	113	162	0.94
Transmembrane Helix	163	184	0.87
Cytoplasmic	185	192	0.81
Transmembrane Helix	193	212	0.89
Non-Cytoplasmic	213	220	0.77
Transmembrane Helix	221	242	0.87
Cytoplasmic	243	276	0.94