YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	IL1R2_MOUSE
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.98
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFILLVLVTG VSAFTTPTVV HTGKVSESPI TSEKPTVHGD NCQFRGREFK SELRLEGEPV  60
   61 VLRCPLAPHS DISSSSHSFL TWSKLDSSQL IPRDEPRMWV KGNILWILPA VQQDSGTYIC 120
  121 TFRNASHCEQ MSVELKVFKN TEASLPHVSY LQISALSTTG LLVCPDLKEF ISSNADGKIQ 180
  181 WYKGAILLDK GNKEFLSAGD PTRLLISNTS MDDAGYYRCV MTFTYNGQEY NITRNIELRV 240
  241 KGTTTEPIPV IISPLETIPA SLGSRLIVPC KVFLGTGTSS NTIVWWLANS TFISAAYPRG 300
  301 RVTEGLHHQY SENDENYVEV SLIFDPVTRE DLHTDFKCVA SNPRSSQSLH TTVKEVSSTF 360
  361 SWSIALAPLS LIILVVGAIW MRRRCKRRAG KTYGLTKLRT DNQDFPSSPN

Type	Start	End	Confidence
Signal Peptide	1	22	0.96
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	359	0.99
Transmembrane Helix	360	381	0.93
Cytoplasmic	382	410	0.99