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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CTSRB_MOUSE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.49
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESPLIYVML VLLNVFVFSS GVIHNKGKER TYFSCSGEGI LTGLHTIKLF LTMDNLKVRC  60
   61 FFRNENQSPS KEILGLFTSG GLAPNMIITN STFYGGYYFK LTPFSNRLEW LIDIPRQNIT 120
  121 VNTDIAAVEQ WMIKITMHEG LNIYDTEGTL LDLVREPILQ WNLGRVLTEM EVRDLYPEVN 180
  181 DIKVTKSPCA NDVALIGFMM KPSSNGVFIG KTISGFWTYK ECIWHDLTEI IYAELKDEHQ 240
  241 GLTVIDLVLT NHFLVILTSL GLYVSSDLRY PTTSQIKLSR AEFCGFERVD YIRGNLWYNE 300
  301 KCFANRESFE VDYVTITFNR NRTLSESSSC FFSKEPFLHW LPCVFSTIKN EKSIPRVITF 360
  361 LIDQETDSGI YLFNVQDTKE TYVTVAMLKD GKPSPRPKFP SFHFPSTFTL PLGMIFHPRS 420
  421 HFLYVYGSQI WVSMDGGNTF EMLCNLFSHH VTKTSNSFYT SDIVFIVEDG RILTTKAGLT 480
  481 TYSELGILKD AIFTLYYDQL GYIHKLTPEN FDAGSKLLGH GNSGSIFGKR PDLGFEAILV 540
  541 PQYISTNEMY FFAHVPLTMP TNIQWKKRFK TIHLGKTIEF SKTGLANIKN VYMHKTEPVG 600
  601 FQTSIHTEII VPFGIENSKD SPCLLSDLEI TYSGKLYYTI KLLSKNPLHE LKSTDVEKSV 660
  661 LIPGYSSFLI MNITDKWTAS ALATMPQAIK SNLKFLTGSW FLYNFGTAGG RKWSISTRQC 720
  721 NYWIQQDSLD FMSLNLVKYI DVGNTIDFQF KIIPKAMSTF PIPPVSMVVG NPGLVEVKTQ 780
  781 GVFDLNENYY LDIHVSGRFF QKGSTSIALV LWEGSSKCYA ITLLPTIKSS CSYLRTMHHT 840
  841 PGRHIPPEDW ISGVHKDSQG FNMIKTLPIN YRPPSHMGIS IPLTDNFYHA DPSKPIPRNQ 900
  901 FHKSKETGKY KQCANVTSRA MCNCSEHQKF SHAVAFSDCK EKVHRFKFPV TQYPVVLEIF 960
  961 NERDKISAEP PYLVTMTEVN MRKNWQLKHN EPENVKKMKH YLEPLLKTPV YNPLGLNLTI1020
 1021 QGSELFHFKV SVVPGVSFCE LSEEFQIYVD EVPLPFPGHA LIAVATSVVL GVLIFIAFVF1080
 1081 QLRNIHPLKA LKKSIRGNPG LTSSTTVSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle