YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ABCC9_MOUSE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.14
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSFCGNNI SSYNIYYGVL QNPCFVDALN LVPHVFLLFI TFPILFIGWG SQSSKVQIHH  60
   61 NTWLHFPGHN LRWILTFALL FVHVCEIAEG IVSDSHRASR HLHLFMPAVM GFVATTTSIV 120
  121 YYHNIETSNF PKLLLALFLY WVMAFITKTI KLVKYWQLGW GVSDLRFCIT GVMVILNGLL 180
  181 MAVEINVIRV RRYVFFMNPQ KVKPPEDLQD LGVRFLQPFV NLLSKATYWW MNTLIISAHR 240
  241 KPIDLKAIGK LPIAMRAVTN YVCLKEAYEE QKKKAADHPN RTPSIWLAMY RAFGRPILLS 300
  301 STFRYLADLL GFAGPLCISG IVQRVNEKTN TTREMFPETL SSKEFLENAH VLAVLLFLAL 360
  361 ILQRTFLQAS YYVTIETGIN LRGALLAMIY NKILRLSTSN LSMGEMTLGQ INNLVAIETN 420
  421 QLMWFLFLCP NLWAMPVQII MGVILLYNLL GSSALVGAAV IVLLAPIQYF IATKLAEAQK 480
  481 STLDYSTERL KKTNEILKGI KLLKLYAWEH IFCKSVEETR MKELSSLKTF ALYTSLSIFM 540
  541 NAAIPIAAVL ATFVTHAYAS GNNLKPAEAF ASLSLFHILV TPLFLLSTVV RFAVKAIISV 600
  601 QKLNEFLLSD EIGEDSWRAG EGTLPFESCK KHTGVQSKPI NRKQPGRYHL DSYEQARRLR 660
  661 PAETEDIAIK VTNGYFSWGS GLATLSNIDI RIPTGQLTMI VGQVGCGKSS LLLAILGEMQ 720
  721 TLEGKVYWNN VNESEPSFEA TRSRSRYSVA YAAQKPWLLN ATVEENITFG SPFNRQRYKA 780
  781 VTDACSLQPD IDLLPFGDQT EIGERGINLS GGQRQRICVA RALYQNTNIV FLDDPFSALD 840
  841 IHLSDHLMQE GILKFLQDDK RTVVLVTHKL QYLTHADWII AMKDGSVLRE GTLKDIQTKD 900
  901 VELYEHWKTL MNRQDQELEK DMEADQTTLE RKTLRRAMYS REAKAQMEDE DEEEEEEEDE 960
  961 EDNMSTVMRL RTKMPWKTCW WYLTSGGFFL LFLMIFSKLL KHSVIVAIDY WLATWTSEYS1020
 1021 INHPGKADQT FYVAGFSILC GAGIFLCLVT SLTVEWMGLT AAKNLHHNLL NKIILGPIRF1080
 1081 FDTTPLGLIL NRFSADTNII DQHIPPTLES LTRSTLLCLS AIGMISYATP VFLVALAPLG1140
 1141 VAFYFIQKYF RVASKDLQEL DDSTQLPLLC HFSETAEGLT TIRAFRHETR FKQRMLELTD1200
 1201 TNNIAYLFLS AANRWLEVRT DYLGACIVLT ASIASISGSS NSGLVGLGLL YALTITNYLN1260
 1261 WVVRNLADLE VQMGAVKKVN SFLTMESENY EGTMDPSQVP EHWPQEGEIK IHDLCVRYEN1320
 1321 NLKPVLKHVK AYIKPGQKVG ICGRTGSGKS SLSLAFFRMV DIFDGKIVID GIDISKLPLH1380
 1381 TLRSRLSIIL QDPILFSGSI RFNLDPECKC TDDRLWEALE IAQLKNMVKS LPGGLDATVT1440
 1441 EGGENFSVGQ RQLFCLARAF VRKSSILIMD EATASIDMAT ENILQKVVMT AFADRTVVTI1500
 1501 AHRVSSIVDA GLVLVFSEGI LVECDTGPNL LQHKNGLFST LVMTNK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle