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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|10638066, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKARSGAAG LGLKLFLLLP LLGEAPLGLC FSRDAYWERL YVDQPAGTPL LYVHALRDAP  60
   61 GEVPSFRLGQ YLYGVYRTRL HENDWIHIDA GTGLLYLNQS LDHSSWEQLS IRNGGFPLLT 120
  121 VFLQVFLGST AQREGECHWP GCARVYFSFI NDTFPNCSSF KARDLCTPET GVSFRIRENR 180
  181 PPGTFYQFRM LPVQFLCPNI SVKYKLLEGD GLPFRCDPDC LEVSTRWALD RELQEKYVLE 240
  241 AECAVAGPGA NKEKVAVSFP VTVYDDEDDS PPTFSGGVGT ASAVVEFKRK EGTVVATLQV 300
  301 FDADVVPASG ELVRRYTSTL LSGDSWAQQT FRVEHTPNET LVQSNNNSVR ATMHNYRLVL 360
  361 NRSLSISESR VLQLVVLVND SDFQGPGSGF LFLHFNVSVL PVTLNLPMAY SFPVNRRARR 420
  421 YAQIGKVCVE NCQEFSGVSI QYKLQPSSTN CSALGVVTST EDTSGTLYVN DTEALRRPEC 480
  481 TELQYTVVAT DRQTRRQTQA SLVVTVEGTY IAEEVGCPKS CAVNKRRPEC EECGGLGSPT 540
  541 GRCEWRQGDG KGTTRNFSTC SPSTRTCPDG HCDALESRDI NICPQDCLRG PIVGGHERGE 600
  601 RQGIKAGYGI CNCFPDEKKC FCEPEDSQAP LCDELCRTVI TAAVLFSFII SVLLSTFCIH 660
  661 RYHKHXXKPP IXSAEMTFCR PAQGFPISYS SSGXRRPSLD SMENQVSVDS FKIPEDPKWE 720
  721 FPRKNLVLGK TLGEGEFGKV VKATAFRLKD RAGYTTVAVK MLKENASQSE LRDLLSEFNL 780
  781 LKQVNHPHVI KLYGACSQDG PLLLIVEYAK YGSLRGFLRD SRKIGPAYVS SGGSRNSSSL 840
  841 DHPDERVLTM GDLISFAWQI SRGMQYLAEM KLVHRDLAAR NILVAEGRKM KISDFGLSRD 900
  901 VYEEDSYVKK SXGRIPVNWM AINSLSDHFY TTQSDVWSFG VLLWEIVTLG GNPYPGIPPE 960
  961 RLFNLLKTGH RMERPNNCSE EMYRLMLQCW KQEPDKRPVF ADISKDLEKM MVKSRDYLDL1020
 1021 AASTPSDSLL YDDGLSEEET PLVDCNSAPL PRSLPSTWIE NKLYGMSDPN WPGESPVPLT1080
 1081 RADGTSTGFP RYANDSVYAN WMVSPSAAKL MDTFDS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle