YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ADRB3_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPWPHKNGS LAFWSDAPTL DPSAANTSGL PGVPWAAALA GALLALATVG GNLLVITAIA  60
   61 RTPRLQTITN VFVTSLATAD LVVGLLVMPP GATLALTGHW PLGATGCELW TSVDVLCVTA 120
  121 SIETLCALAV DRYLAVTNPL RYGTLVTKRR ARAAVVLVWI VSATVSFAPI MSQWWRVGAD 180
  181 AEAQECHSNP RCCSFASNMP YALLSSSVSF YLPLLVMLFV YARVFVVAKR QRRLLRRELG 240
  241 RFPPEESPRS PSRSPSPATV GTPTASDGVP SCGRRPARLL PLGEHRALRT LGLIMGIFSL 300
  301 CWLPFFLANV LRALVGPSLV PSGVFIALNW LGYANSAFNP LIYCRSPDFR DAFRRLLCSY 360
  361 GGRGPEEPRV VTFPASPVAS RQNSPLNRFD GYEGERPFPT

Type	Start	End	Confidence
Non-Cytoplasmic	1	34	0.93
Transmembrane Helix	35	56	0.93
Cytoplasmic	57	70	0.73
Transmembrane Helix	71	92	0.86
Non-Cytoplasmic	93	109	0.78
Transmembrane Helix	110	134	0.81
Cytoplasmic	135	150	0.95
Transmembrane Helix	151	171	0.90
Non-Cytoplasmic	172	206	0.93
Transmembrane Helix	207	227	0.94
Cytoplasmic	228	286	0.99
Transmembrane Helix	287	308	0.90
Non-Cytoplasmic	309	313	0.73
Transmembrane Helix	314	337	0.71
Cytoplasmic	338	400	0.91