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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149065354, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.78
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYFLFFRLF LLWVLAAFSQ GKRLSPTSPL RYSRFLDPSH AVFLRWDFDY ETEIITFELQ  60
   61 VQTTGWVGLG ITDRYTFVGS DLVVGGVLPN GNVYFSDQHL LDEDTLEQDG SQDAELLKLT 120
  121 EDSVSTTMRF SRPFRSCDPH DHDITSDTMR VLAAYGLDDI PKMNRERTFV KSIFLLQILQ 180
  181 YDDEDAPEDT VIYDLKISNF LIPEEDTTYA CTFLPLPIVS KKHHIYKFEP ILVERNETMV 240
  241 HHVLVYACGN SSVLPTGIGE CYGADPAFSL CSHVIAGWAV GGLSYQFPDD VGISIGTPFD 300
  301 PQWIRLEIHY SNFQNLPGIR DTSGMRLYYT SHLRKYDMGV LQLGISVFPI HFIPPGAEAF 360
  361 LSYGLCKTDK FEEMNGAPVA DIYVSACLLH THLAGRSLQA LQYRNGTQLQ IVCKDFSYDF 420
  421 NLQESRDLPH PVVIKPGDEL LIECHYQTLD RDFMTFGGAS TINEMCLIFF FYYPRINISS 480
  481 CMGYPDIIYV TNELGEEASE NPMENLMVLN NVEWTPENIK TAEKACKESQ QTVLIKTIDE 540
  541 EVENTTGWIP DIIPTPRGAC LESSGGKVEP QDKTPAGFRA VPMALSGSNT ATLRHLPMIT 600
  601 VLFLQGCLSW LLAMLQTGV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle