YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	B2L10_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDPLQDRTR RLLTDYILFC ARAPNTPEPL PTSVEAALLR SVTSQIQQEH QDLFNSFRDY  60
   61 QGNRLELVTQ MADELLSNDQ EFNWGRLVML LAFVGTLMNQ DRTVKRRRDQ RNRLLLERDC 120
  121 YLIVSLLYNR LTGRHRSWLE AHGGWDGFCQ FFKNPLPPGF WRRLLIRAIL SCFFATAIFY 180
  181 IWKCL

Type	Start	End	Confidence
Cytoplasmic	1	163	0.70
Transmembrane Helix	164	182	0.95
Non-Cytoplasmic	183	185	0.65