YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	IL1R2_RAT
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFILLVLVTG VSAFTTPAVV HTGRVSESPV TSEKHPVLGD DCWFRGRDFK SELRLEGEPV  60
   61 VLRCPLVPHS DTSSSSRSLL TWSKSDSSQL IPGDEPRMWV KDDTLWVLPA VQQDSGTYIC 120
  121 TFRNASHCEQ MSLELKVFKN TEASFPLVSY LQISALSSTG LLVCPDLKEF ISSRTDGKIQ 180
  181 WYKGSILLDK GNKKFLSAGD PTRLLISNTS MGDAGYYRCV MTFTYEGKEY NITRNIELRV 240
  241 KGITTEPIPV IISPLETIPA SLGSRLIVPC KVFLGTGTSS NTIVWWMANS TFISVAYPRG 300
  301 RVTEGLHHQY SENDENYVEV SLIFDPVTKE DLNTDFKCVA TNPRSFQSLH TTVKEVSSTF 360
  361 SWGIALAPLS LIILVVGAIW IRRRCKRQAG KTYGLTKLPT DNQDFPSSPN QIKEMK

Type	Start	End	Confidence
Signal Peptide	1	22	0.94
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	359	0.99
Transmembrane Helix	360	381	0.94
Cytoplasmic	382	416	0.99