YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|8895493
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLFPAPYW EVLYGSHFQG NLSLLNETVP HHLLLNASHS AFLPLGLKVT IVGLYLAVCI  60
   61 GGLLGNCLVM YVILRDRVPG GDPCPSGLLG PCIRHLHLPF FLHHPCADHL CLLQPHDSTT 120
  121 SWCPSAFRLP GEGPKPAAYH STGAGSGGCV CGLLDACAGV CPGSRTGCSA R

Type	Start	End	Confidence
Non-Cytoplasmic	1	50	0.45
Transmembrane Helix	51	73	0.87
Cytoplasmic	74	171	0.50