YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KAD4_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASKLLRAVI LGPPGSGKGT VCERIAQNFG LQHLSSGHLL RENLKTNTEV GDVAKQYLEK  60
   61 GLLVPDHVIT RLMMSELETR SAQHWLLDGF PRTLVQAEAL DRICDVDLVI SLNIPFETLK 120
  121 DRLSRRWIHP SSGRVYNLDF NPPQVLGVDD ITGEPLVQQE DDKPEALAAR LRRYKDAAKP 180
  181 VIELYKSRGV LHQFSGTETN RIWPYVYTLF SNKITPIQSK EAY

Type	Start	End	Confidence
Signal Peptide	1	17	0.72
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	223	0.99